Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq192 91.5 3e-13 seq2085 84.2 4e-11 >seq192 Length=15063 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/92 (83%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 294658 ATTTGGCGGAAGCGCAGAGATTCGAACTCTAGGGGCCCTTTGGACCCGTCTGATTTCAAG 294717 || ||||||||||||||||||||||||||| || |||||| | || | | ||||||| Sbjct 5505 ATATGGCGGAAGCGCAGAGATTCGAACTCT-GGAACCCTTTCGGGTCGCCGGTTTTCAAG 5447 Query 294718 TCAGGTGCCTTAAACCACTCGGCCACGCTTCC 294749 | |||||||| |||| ||||||||| ||||| Sbjct 5446 ACCGGTGCCTTCAACCGCTCGGCCACACTTCC 5415 >seq2085 Length=1301 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1031 ATCCCATGGCACATCCCCGAAGACTTCAAATGGTTCAAAGAGAAAACCTTGGGCCATCCA 1090 || || ||||| | || | || ||||||| ||||| | | ||||||||| | || Sbjct 383 ATGCCCTGGCATTTGCCGGGGGATTTCAAATATTTCAAGGCCACTACCTTGGGCAAGCCG 324 Query 1091 GTGATCATGGGTCGTAAGACCTGGGAATCCATTGGTCGTCCTTTGCCGGGTCGTCTGAAT 1150 | |||||||| || ||||||||||| ||| | || || || |||||||| || |||| Sbjct 323 ATCATCATGGGGCGCAAGACCTGGGATTCCCTGGGGCGACCGTTGCCGGGCCGGTTGAAC 264 Query 1151 ATCGTGGTCAG 1161 || |||||||| Sbjct 263 ATTGTGGTCAG 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988976598866731