Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq2516 192 6e-44 seq2261 109 6e-19 >seq2516 Length=21774 Score = 192 bits (212), Expect = 6e-44 Identities = 153/183 (84%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180 |||| || |||||||||||||| |||||||| ||||| || || || ||| |||||| Sbjct 1786 GTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACCCTGCTGGACGCGGTTGAGCATC 1845 Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240 | ||||||||||||||||||||||| ||||| || || || || || ||||| ||||||| Sbjct 1846 CGGAAAAATATCCGCAGCTGACCATTCGTGTTTCCGGCTACGCGGTACGCTTCAACTCTC 1905 Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAGAGTCTATAATGGC 123300 |||| |||||||||||||||||||| ||||| || |||||||| || || || ||| ||| Sbjct 1906 TGACGCCGGAACAGCAGCGCGACGTAATCGCCCGTACCTTTACCGAAAGCCTGTAA-GGC 1964 Query 123301 TAA 123303 ||| Sbjct 1965 TAA 1967 >seq2261 Length=3986 Score = 109 bits (120), Expect = 6e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180 |||| || |||||||| ||||| || || |||| || || || | | | | Sbjct 512 GTCAGCACCTGAACGTGAACGTCATGAACCGCGAAATGCTGCTCGACGCGATGGAAAACC 571 Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240 | ||||||||||||||||||||||||||||||||||| || || || || |||||||| | Sbjct 572 CGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGTTTTAACTCCC 631 Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAGA 123288 |||| |||||||||| || ||||| | || ||||| ||| ||| Sbjct 632 TGACCAAAGAACAGCAGCAGGATGTTATTACCCGTACCTTCACTCAGA 679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539748689202520