Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq19 129 5e-25 >seq19 Length=770976 Score = 129 bits (142), Expect = 5e-25 Identities = 557/871 (64%), Gaps = 20/871 (2%) Strand=Plus/Minus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 |||||| || || || || || || |||||||| |||||||||| | || || | Sbjct 360852 TTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCAT 360793 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTT--TTTCACACTTTAGAGCTAC 4372 |||||||||||||||||||| || || | || || || | | || | | || | Sbjct 360792 CTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTC--CTGC 360735 Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAA 4431 | || ||| ||| || ||||| || |||||||| ||| |||| ||| || || || | Sbjct 360734 A-GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCA-TTCATCCCGA 360677 Query 4432 TTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491 | | || || | || | ||| | ||| || | ||| || ||| || || || Sbjct 360676 TCAGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGA 360617 Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAA-CAC 4550 | || | | | || | |||||||| | || || | || | || Sbjct 360616 TAATTCCATGAACGACTTCCTGGCTCAGTTTATTTT-TGAGCATTTTATAAAGCAGGCAG 360558 Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 ||||| |||||||||| || || |||||| ||||| || ||| ||| |||| || Sbjct 360557 GCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCT 360498 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||| | ||||| ||||| | ||| || || | || ||| ||||| ||| Sbjct 360497 GGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATG 360438 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT--GTCTTTAA 4728 ||||| || ||||| || || || || || | || ||| | | | || Sbjct 360437 CCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAA--------TTTCCGCCCTCAA 360386 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| |||||||| | ||||||||||| || || |||| || | || || | | Sbjct 360385 TCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGA 360326 Query 4789 ATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTT 4848 | | | |||||| || |||| |||||| || || || || || ||| ||| Sbjct 360325 ACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTT 360266 Query 4849 CAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTT 4908 |||| || || ||||| || ||||| || || ||||| || | ||||| | | | Sbjct 360265 CAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCT 360206 Query 4909 GAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAA 4968 | |||||| | || | || | | |||||| ||||| || |||||||| || |||| Sbjct 360205 GTACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAA 360146 Query 4969 AAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGG 5028 |||| || | | |||||| || || | | ||| | | || | || | |||||| Sbjct 360145 AAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCT 360086 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088 | || | || | |||| ||||||| | ||||| || ||||| || || | Sbjct 360085 TCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTAT 360026 Query 5089 ACATAGACCAAATATCAGGATACTGAATCGG 5119 |||| ||| || ||||| || | ||| || Sbjct 360025 ACATTTCCCAGATTTCAGGGTATTTAATAGG 359995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426902687864591