Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq19644 212 4e-50 >seq19644 Length=1527 Score = 212 bits (234), Expect = 4e-50 Identities = 253/338 (75%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 72619 CGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCC 72678 ||| ||||| ||||||||| | |||||||| || ||||| ||||| ||||||| ||| | Sbjct 1202 CGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCGAGCTGCGCTACACGCA 1143 Query 72679 CTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAA-GC 72737 || |||||| || ||||||||| ||||| || || ||| |||||||| || Sbjct 1142 GAACGGGCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCTCGGAACTTCGACCGTGC 1083 Query 72738 AGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACA-TCTGGCGCGAG 72796 | | || ||||||||||||| ||| ||||| ||||| || |||| | ||||||||||| Sbjct 1082 CG-CGAATGAGTGGAAGGACGGCGATGCGCTGTTCCTCCG-TGCATCCGTCTGGCGCGAG 1025 Query 72797 CCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGC 72856 |||||| |||| | | ||| || | ||||||||||||||||||| ||||| || Sbjct 1024 TTCGCCGAGCACGTGGCGGGTTCGTTGACGAAGGGCATGCGCGTCATCGCGCAGGGCCGT 965 Query 72857 CTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAG 72916 || |||||| |||| || || ||| | | || || | |||||||| ||| Sbjct 964 CTGCGTCAGCGCTCCTACCAGGACCGCGAGGGCAACCAGCGCACCGCGATCGAGCTGGAG 905 Query 72917 GTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGC 72954 ||||| |||||||||||| |||| |||||||| ||||| Sbjct 904 GTCGACGAGATCGGCCCCTCGCTCCGGTACGCGACCGC 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299567308419109