Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq2516 152 6e-32 seq2261 109 6e-19 >seq2516 Length=21774 Score = 152 bits (168), Expect = 6e-32 Identities = 113/132 (86%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 60709 TTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60768 ||||| || | ||| || ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 1961 TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGA 1902 Query 60769 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828 ||| ||||| || || || ||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1901 GTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATG 1842 Query 60829 CTTAACTGCATC 60840 || ||| || || Sbjct 1841 CTCAACCGCGTC 1830 >seq2261 Length=3986 Score = 109 bits (120), Expect = 6e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 60708 ATTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60767 |||||| ||| ||||| ||||| | ||||| || |||||||||| ||||| | Sbjct 688 ATTACATGGTCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGG 629 Query 60768 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGG 60825 ||||||| || || || || || ||||||||||||||||||||||||||||||||||| Sbjct 628 AGTTAAAACGTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGG 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546200811848160