Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq19 329 4e-85 seq3533 206 4e-48 seq1043 150 2e-31 seq3128 84.2 3e-11 >seq19 Length=770976 Score = 329 bits (364), Expect = 4e-85 Identities = 810/1221 (66%), Gaps = 28/1221 (2%) Strand=Plus/Minus Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478 || ||||||| ||||| ||||| | ||||| | | || ||| | ||| ||||| | Sbjct 362633 CGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCAAATG 362574 Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 | || | | || ||||| |||||||| |||||||| || || | ||||| ||||| | Sbjct 362573 GTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGTCTGT 362514 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | | | | |||||| |||||||||| | |||||||||||| || |||||||||| Sbjct 362513 GGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATTTTAT 362454 Query 77599 TGAGATTTCTAACAAC----TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 | || || | | || ||| | || | || ||| || |||||| | Sbjct 362453 TCAGGTTCAGGGTAGCCTGATAGGTTA----CATCATATAATTTCTGATGATCAAACTCT 362398 Query 77655 CCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714 || | || ||||| | |||||| | || || || ||||| || || ||||| | Sbjct 362397 CCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGT-- 362340 Query 77715 GCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | |||| | || | ||| || || ||||| || || || |||||| || || | | Sbjct 362339 -CTTTGGAAGTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAA 362281 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 ||||| |||||| || | || || || ||||| | | | | || || |||||| Sbjct 362280 TTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTT 362221 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTT---G 77888 ||||||||||| || | ||| | ||| | || ||||| || | ||| | Sbjct 362220 TCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGCTTTAATGGT---TTTACGG 362164 Query 77889 TATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCA 77948 || | ||| |||| || | ||||| || ||||| | || | ||| Sbjct 362163 GCACGTCCTTCTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCAAAGCAATCT 362104 Query 77949 TCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGT 78008 ||| ||| ||| ||||| || || | || |||||| || | ||| | || | | Sbjct 362103 GCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCCTT 362044 Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068 |||| || || ||| || ||| || ||| |||| ||||| || | | ||||||| Sbjct 362043 CTCATGAACAGGTCACATACCCAAAGGGCATAGAATAAATCTCTGGCACGAAGTTCTTCT 361984 Query 78069 TTTCCTGTATTCTTTTTA---AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 78125 || || || |||||| || || ||||| || | ||| | ||||||||| || Sbjct 361983 TTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGCTCC 361927 Query 78126 AGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTG 78185 || || || || | | | || |||||| || ||||| || | ||| | |||||| Sbjct 361926 AGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCGGTA 361867 Query 78186 TTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 | ||| | ||| ||||||| || | ||| || || || || ||||||||| |||| Sbjct 361866 TCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCAATA 361807 Query 78246 TAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGAT 78305 ||| ||| | || || || ||| ||| || || || || ||||| | | || Sbjct 361806 TAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGTGAA 361747 Query 78306 ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTA 78365 ||| |||| |||| || |||||||| || || || |||||||| ||| |||| | Sbjct 361746 ATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATGGTC 361687 Query 78366 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGAT 78425 || | ||| ||| |||||||||| | | | || ||||||||||||| || || | | Sbjct 361686 AGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGGGTT 361627 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 |||||||||||||| ||| | || || || ||| |||| || ||| || || Sbjct 361626 GCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATATCT 361567 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 || ||||| ||||| || |||||||| |||| ||| || || | ||| || | || Sbjct 361566 TCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT-TTG 361508 Query 78546 TTATT-TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || |||||||| || || |||||||| | |||||||| |||||||| | | || Sbjct 361507 TCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAATCC 361448 Query 78605 AAAGTCTCTCTCGTAAATAAT 78625 ||| || || || |||||||| Sbjct 361447 AAAATCCCTGTCATAAATAAT 361427 Score = 217 bits (240), Expect = 2e-51 Identities = 583/879 (66%), Gaps = 13/879 (1%) Strand=Plus/Minus Query 47848 TTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 47907 |||||||||| ||||||||||||||||| || ||||| |||||||||| || || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 47908 TTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATT-CTGAA 47966 | |||||||||||||| ||||| |||| ||| ||||| || | || | || ||| | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 47967 ATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATA 48026 || ||| |||||||| || || ||||| | ||||| || |||||| || || Sbjct 360733 GCCA-TCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 360675 Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086 || ||| || | || || |||| ||| || | |||||| || || || || Sbjct 360674 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 360615 Query 48087 A-TCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145 | || ||| || ||||| || || || | |||| | | | || || Sbjct 360614 ATTCCATG-AACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGC 360556 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||| |||||||| | || |||||||| ||| || || ||| ||| || || || || Sbjct 360555 AAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGG 360496 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG-AAAAGAATATGC 48264 ||| || || | |||||| | ||| || || | | ||| ||| | ||||| |||| Sbjct 360495 CATCAGGCCTCTTTTTTTCAACCAGAAGATCG-AACAGAAGCTCCCGCTGAAGAAAATGC 360437 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACC 48324 |||| || || || || || | | || | || | | || | ||||| | Sbjct 360436 CTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATT---TCCGCCCTCAATCCAGC 360380 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 | |||||| || || || |||||||||||||| | || |||| |||| || || Sbjct 360379 GCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCC 360320 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 || |||||| | |||||||| || ||||| || | || ||| |||| |||| Sbjct 360319 TGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGT 360260 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || ||||| || ||||| || || |||||||| | ||||| | | ||||| || Sbjct 360259 GGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTA-CT 360201 Query 48505 CCGTACAAAATCGTTCA--GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || || | ||||| || | || |||||||| || || ||||| ||||||||||| Sbjct 360200 TCGCTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAA 360142 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622 || | || ||| ||| |||| ||| | | | | || | ||||| || Sbjct 360141 AGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTG 360082 Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACAT 48682 || | || | || | ||||||||| ||||| || ||| || || |||||||| Sbjct 360081 GTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACAT 360022 Query 48683 ATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||| || ||| ||||| || || |||| |||||| Sbjct 360021 TTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 >seq3533 Length=1137 Score = 206 bits (228), Expect = 4e-48 Identities = 485/722 (67%), Gaps = 15/722 (2%) Strand=Plus/Minus Query 48014 ATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073 ||||||||| || || | |||||| || | || || | |||||||| ||| || ||| Sbjct 1081 ATTCATTCCAATTAGATCAACTGGCAGCGAATCTGTGATAAACTCTTTCTCGCAAGAGAC 1022 Query 48074 AGCATCCACTATTATCGATGTTACCGTTTCCT-CACTTGGTGGATACAACAAATGTTTAA 48132 ||| || || || || || ||| | | || | || | || || | |||| Sbjct 1021 AGCGTCGCGGATGATAGACTCTATAGTTGCTGGCTCTAGACGG-TGCACCAGCTTTTTAT 963 Query 48133 ACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAA 48192 ||| | || ||||| || || || ||||| || || | ||| || | ||||| |||| Sbjct 962 ACAGCATGCAAGCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTTGGAAA 903 Query 48193 ATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG 48252 | || || || ||||||| || | ||| || | ||| | || || | |||| | | | Sbjct 902 AGGTAAGGCCTGGCATTAAACCCCTTTTCTTCAACCAGTAGATGGCA-CAAAAGCTGCCG 844 Query 48253 AA-AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA---ACTGGCT 48308 ||||| || || || || || |||||||| | | || || | || | Sbjct 843 CTGAAGAAGATACCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAATGAACAAGAG 784 Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 | | || ||||| || | ||||| || |||||||||||||| || || || ||| Sbjct 783 TTGGTG---ATCCAGCGCAGCGCCCACTCTGCCTTCTTCTTTACGGCGGGGATCGTCTCT 727 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 || || || || || | ||| | ||||| ||||||||| || || || |||||| Sbjct 726 ATCGCGTTGAAAAGCTCCTGTTTCTTTGTGCTACTTTTAACGTATGTGTCGATCAAAAGA 667 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 || || | || | |||||| || ||||| || |||||||| || || || || | || Sbjct 666 CTGTAGGTCTCTGCGTGAATGTTCTCAATCGCGATCTGAAAGCCATAGAAGCAGCGGGCC 607 Query 48489 TCTGTGATCTGTACCTCCGTACA-AAATCGTTCAGCCAAATTCTCATTTACTATTCCATC 48547 |||| || |||||||| | ||| ||||| || | ||||||||| || || || || Sbjct 606 TCTGGTATTTGTACCTCAG-ACATGAATCGAGTGGCGAGATTCTCATTGACGATACCGTC 548 Query 48548 ACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT 48607 || ||||| ||||| | |||| | ||||| | | ||||||| | | || || Sbjct 547 TGATGCGGCAAAGAATGCCAGCACATTGGTGATAAAGTGTCGTTCGTTGTCATTGAGCTT 488 Query 48608 ATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGC 48664 || ||| || || ||||| | | |||| ||| || |||||||| ||||| || Sbjct 487 GTTCTCCCAATCGTTCATATCAGAAGCCAAGTCTAATTCCTCTGCTGTCCAGAATGAAGC 428 Query 48665 CTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 |||||||| || ||||||| |||||| || | | || ||| ||||| | ||| ||||| Sbjct 427 TTCTGCTTTCTTGTACATATCCCATATGTCTGTATGTTTGATAGGGAAGAGAACGAATCT 368 Query 48725 AT 48726 || Sbjct 367 AT 366 >seq1043 Length=1979 Score = 150 bits (166), Expect = 2e-31 Identities = 388/588 (66%), Gaps = 5/588 (1%) Strand=Plus/Plus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| ||||| || || || | ||| || || | ||| || | ||||| || || | Sbjct 213 AAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGAACGAC 272 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 | ||| |||||| || || || ||||||||||| || | |||| ||| |||| Sbjct 273 AAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGAGCAGAAACTGCCACTAAAG 332 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT 48317 || || || || || || ||||| ||| | | ||| || | | ||||| Sbjct 333 AAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCGTTGGTG 392 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || ||||| || || |||||||| || || || || || || || | Sbjct 393 ATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCGATGGCGTGG 452 Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437 ||||| | ||| || | | | | | || | ||| || || || | |||||| || | Sbjct 453 AAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAAGACTGTAGGTC 512 Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 || ||||| || || || || || || || ||||| || ||||| | || |||| |||| Sbjct 513 TCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTGCCTCTGGGATC 572 Query 48498 TGTACCTCCGTACA-AAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGC 48556 || ||||| | ||| || ||| || | |||||| || || || || || || || Sbjct 573 TGCACCTCAG-ACATGAAGCGTGTGGCAAGATTCTCGTTGACAATGCCGTCCGATGCGGC 631 Query 48557 AAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCA 48613 ||| || || | ||| || | ||||| | ||||| |||| || || ||| Sbjct 632 AAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGTTCAGCTTGTTCTCCCA 691 Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673 || | || || ||| | ||| | ||||| |||||||| || ||||||||||| || Sbjct 692 ATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAAGATGCCTCTGCCTT 751 Query 48674 TTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||||| ||||| || || || | ||| ||||| | ||||| Sbjct 752 CTTGTACATGTTCCAAATGTCCGGGTGCTTGATAGGGAAGAGTACAAA 799 >seq3128 Length=12816 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 95809 TTTCCTGACATAGTAGAATTTTGTGAACTCATGGCAAACAATGGAAAAATAGTTATAGTG 95868 || || ||| ||||| ||| ||||| |||||||||| || || | ||| ||||| Sbjct 1820 TTCCCAGACGTAGTACCATTCAGTGAAGAGTTGGCAAACAAAGGCAAGACAGTGATAGTA 1879 Query 95869 GCAGCATTAGATGGAACATTTCAACGCAAGCCGTTT 95904 |||||||||||||||||||| ||||| || |||||| Sbjct 1880 GCAGCATTAGATGGAACATTCCAACGAAAACCGTTT 1915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694423694797280