Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq19 297 3e-75 seq3533 170 3e-37 seq1043 122 1e-22 >seq19 Length=770976 Score = 297 bits (328), Expect = 3e-75 Identities = 811/1230 (66%), Gaps = 38/1230 (3%) Strand=Plus/Minus Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA--TCTTGCGC-TTCAAGACTA 76066 ||| || ||||||| ||||| ||||| | ||||| | | | |||| | |||| || Sbjct 362637 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCA---CTT 362581 Query 76067 TCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATA 76126 ||||| || || | | || ||||| |||||||| | |||||| || || | ||||| Sbjct 362580 TCAAATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACT 362521 Query 76127 GGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATA 76186 ||||| || | | | |||||| ||| |||||| | || ||||||||| ||| ||| Sbjct 362520 GGTCTGTGGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATA 362461 Query 76187 ATTTTATTGAGATTTCTGACAAC----TACTTTAACCACGTCCTTTAGTTTGAGAAAATC 76242 |||||||| || || | | | || || || || | || ||| || ||| Sbjct 362460 ATTTTATTCAGGTTCAGGGTAGCCTGATAGGTT----ACATCATATAATTTCTGATGATC 362405 Query 76243 AAATTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTAC 76302 ||| | ||| | || ||||| | | ||| | || || || ||||| || || || Sbjct 362404 AAACTCTCCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAAC 362345 Query 76303 CTCATTAGCATTG---GCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGT 76359 ||| | | ||| | ||| | ||| || || || || || || || ||||| || Sbjct 362344 CTCGT---CTTTGGAAGTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGT 362288 Query 76360 TCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGT 76419 ||| | |||||| |||||| || |||| || || ||||| | | | | || || Sbjct 362287 TCCTAAATTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGT 362228 Query 76420 TCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGA 76479 ||| |||||||||||||| || | ||| | ||| | || ||||| || | Sbjct 362227 TCCGGTTTCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGCTTTAAT----GG 362172 Query 76480 TTTGTA---TCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCC 76534 ||| || | | || ||| |||| || | |||||| || ||||| | || Sbjct 362171 TTT-TACGGGCACGTCCTTCTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCA 362113 Query 76535 CAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCC 76594 | ||| ||| || || ||||| ||||| | || ||| || || | ||| Sbjct 362112 AAGCAATCTGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCT 362053 Query 76595 TTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTA 76654 | |||| | |||| || || ||| || ||| || ||| |||| ||||| || | | Sbjct 362052 TCTACCCTTCTCATGAACAGGTCACATACCCAAAGGGCATAGAATAAATCTCTGGCACGA 361993 Query 76655 CGTTCTTCATTTCCTGTATTCTTTTTA---AGATCTAGGAACTCCATAATATCAGAATGC 76711 ||||||| || || || |||||| || || || || || | ||| | |||| Sbjct 361992 AGTTCTTCTTTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGC 361936 Query 76712 CATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATAT 76771 ||||| || || || || || | | |||| |||||| || ||||| || | ||| Sbjct 361935 CATGGCTCCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAA 361876 Query 76772 CTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTT 76831 | ||| || | ||| | ||| ||||||| || | ||| || || || || |||||| Sbjct 361875 CGGGCGGTATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTT 361816 Query 76832 CCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 ||| ||||||| ||| ||||| || ||| || || || || || ||||| Sbjct 361815 CCACCAATATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCG 361756 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 ||| || ||| ||| |||| || || || || || || || ||||| || ||| Sbjct 361755 CTTTGTGAAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCC 361696 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 |||| | || | ||| ||| |||||||||| | | | || |||||||||| || Sbjct 361695 TGCATGGTCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAA 361636 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 || || | |||||| || ||||| ||| | || || || ||| |||| | | Sbjct 361635 GTTGGGGTTGCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTT 361576 Query 77072 TCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCT 77131 || ||||| || ||||| ||||| || |||||||| |||| ||| || || |||||| Sbjct 361575 TCAATATCTTCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCT 361516 Query 77132 ACAGTCTTATTATT-TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190 ||| | || | || |||||||| || || |||||||| | |||||||| |||||||| Sbjct 361515 ACAAT-TTGTCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATA 361457 Query 77191 GTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 | | || ||| || || || |||||||| Sbjct 361456 ATCGAATCCAAAATCCCTGTCATAAATAAT 361427 Score = 248 bits (274), Expect = 1e-60 Identities = 591/880 (67%), Gaps = 15/880 (2%) Strand=Plus/Minus Query 46337 TTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 46396 ||||||| || ||||| ||||||||||| || ||||| |||||||||| || || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 46397 TTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTC-TGAA 46455 | |||||||||||||||||||| || ||| ||| ||||| || | || | ||| || | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 46456 ATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATG 46515 || ||| |||||||| || || |||||| | ||||| || |||||| || || Sbjct 360733 GCCA-TCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 360675 Query 46516 AGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCC--GATA 46573 || ||||| | || || |||| ||| || | ||| || || || || |||| Sbjct 360674 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 360615 Query 46574 TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATG 46633 | || ||| || ||||| || || || | | |||| | | | || | Sbjct 360614 AT-TCCATGA-ACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGG 360557 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 |||| |||||||| | || |||||||| ||| || || ||| ||| || ||||| | Sbjct 360556 CAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTG 360497 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA-AAGAATATG 46752 |||| || || | ||||| | ||| || || | ||| | ||| | ||||| ||| Sbjct 360496 GCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAA-GCTCCCGCTGAAGAAAATG 360438 Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCAC 46812 ||||| || || ||||| || || | | || | || | | | | | ||||| Sbjct 360437 CCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAG 360381 Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872 | ||||| || || ||||||||||||||||| | || |||| |||| || || Sbjct 360380 CGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGC 360321 Query 46873 AAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAA 46932 || |||||| ||| |||||||| ||| ||||| || | || ||| |||| || Sbjct 360320 CTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAG 360261 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 || |||||||| || ||||| || || |||||||| | ||||| | || |||||| Sbjct 360260 TGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACT 360201 Query 46993 TCTGTACAAAATCGTTCA--GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 || | || | ||||| | | || ||||| || || || ||||| |||||||||| Sbjct 360200 TC-GCTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAA 360143 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | || | || ||| ||| |||| || | ||| | | || | ||||| || Sbjct 360142 AAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCT 360083 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 || | || | || | ||||||||| |||||||| || || || ||||||| Sbjct 360082 GGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACA 360023 Query 47171 TATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | | ||| || ||| | |||| || || |||| |||||| Sbjct 360022 TTTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 >seq3533 Length=1137 Score = 170 bits (188), Expect = 3e-37 Identities = 515/784 (66%), Gaps = 11/784 (1%) Strand=Plus/Minus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||||||| |||||| || ||| |||| | | ||||||||| || || | || Sbjct 1120 ATCTGCACAGAATTCAATGTACTGAGACATCGAATTGCTATTCATTCCAATTAGATCAAC 1061 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583 || || | || || | |||||||| || || |||||| || || || || Sbjct 1060 TGGCAGCGAATCTGTGATAAACTCTTTCTCGCAAGAGACAGCGTCGCGGATGATAGACTC 1001 Query 46584 TACTGTTTCCT-CACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCAC 46642 || ||| | | || | || |||| || | |||| ||| | || ||||| || | Sbjct 1000 TATAGTTGCTGGCTCTAGACGG-TGCACCAGCTTTTTATACAGCATGCAAGCAAAGTCGC 942 Query 46643 AATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTC 46702 | || || || || || | ||| || | ||||| ||||| || || || ||||||| | Sbjct 941 AGTGTAGACCCTCGTCACGACTGATCAGCTCGTTGGAAAAGGTAAGGCCTGGCATTAAAC 882 Query 46703 CACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA-AAGAATATGCCTTCTACA 46761 | | || || | ||| | || || | |||| | | | ||||| || || || || Sbjct 881 CCCTTTTCTTCAACCAGTAGATGGCA-CAAAAGCTGCCGCTGAAGAAGATACCCTCAACC 823 Query 46762 GCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA-ATCCACCTTTGAGC 46820 || || ||||| || | | || || || || | | | ||||| | | || Sbjct 822 GCAGCAAATGCCACCAAACGTTCGGCG-AATGAACAAGAGTTGGTGATCCAGCGCAGCGC 764 Query 46821 CCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttttt 46880 ||| || ||||| |||||||| || || || ||||| || || || || | ||| Sbjct 763 CCACTCTGCCTTCTTCTTTACGGCGGGGATCGTCTCTATCGCGTTGAAAAGCTCCTGTTT 704 Query 46881 ttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTT 46940 | ||| |||||| ||||| || || |||||||| || | |||| |||||||| Sbjct 703 CTTTGTGCTACTTTTAACGTATGTGTCGATCAAAAGACTGTAGGTCTCTGCGTGAATGTT 644 Query 46941 TTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACA 47000 ||||| || |||||||| || || || || | || || | || |||||||| | ||| Sbjct 643 CTCAATCGCGATCTGAAAGCCATAGAAGCAGCGGGCCTCTGGTATTTGTACCTCAG-ACA 585 Query 47001 A-AATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATA 47059 ||||| | | ||||||||| || || || || || ||||| ||||||| | Sbjct 584 TGAATCGAGTGGCGAGATTCTCATTGACGATACCGTCTGATGCGGCAAAGAATGCCAGCA 525 Query 47060 CATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC---CAGTCATTGATATCTT 47116 ||| | ||||| | | ||| | | | | || || ||| || || || ||||| Sbjct 524 CATTGGTGATAAAGTGTCGTTCGTTGTCATTGAGCTTGTTCTCCCAATCGTTCATATCAG 465 Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176 | | |||| ||| || |||||||||||||| || |||||||| || ||||||| || Sbjct 464 AAGCCAAGTCTAATTCCTCTGCTGTCCAGAATGAAGCTTCTGCTTTCTTGTACATATCCC 405 Query 47177 ATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAG 47236 |||| || || || ||| || || | ||| ||||||| | |||| | |||| || Sbjct 404 ATATGTCTGTATGTTTGATAGGGAAGAGAACGAATCTATCTTTGTTTTCTCTTAGTAAAG 345 Query 47237 GTTC 47240 |||| Sbjct 344 GTTC 341 >seq1043 Length=1979 Score = 122 bits (134), Expect = 1e-22 Identities = 368/564 (65%), Gaps = 11/564 (2%) Strand=Plus/Plus Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 ||||| ||||| || || || | || || || | ||| || | ||||| || || | Sbjct 213 AAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGAACGAC 272 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 | || |||||| || ||||| ||||||||||| || | |||| ||| |||| Sbjct 273 AAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGAGCAGAAACTGCCACTAAAG 332 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA 46806 || || || || ||||| || || ||||| | | ||| || | | | | || Sbjct 333 AAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCGTTGGTG 392 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTA 46866 ||||| | ||||| || || || ||||| || || || || || || || | Sbjct 393 ATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCGATGGCGTGG 452 Query 46867 AAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926 ||||| | ||| || | || | | || | || || || || | |||||| || | Sbjct 453 AAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAAGACTGTAGGTC 512 Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || || ||||| || || || || || ||||| || ||||| | ||| || | ||| Sbjct 513 TCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTGCCTCTGGGATC 572 Query 46987 TGTACCTCTGTACAA-AATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGC 47045 || ||||| | ||| || ||| | | |||||| || || || || || || || Sbjct 573 TGCACCTCAG-ACATGAAGCGTGTGGCAAGATTCTCGTTGACAATGCCGTCCGATGCGGC 631 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTC---ATCGGTAGTCAGTTTATTC-- 47100 ||| || |||| ||| || | ||||| | || |||| | ||| || ||| Sbjct 632 AAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGTT---CAGCTTGTTCTC 688 Query 47101 -CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || || | || || ||| | ||| | ||||| ||||||||||| || |||||||| Sbjct 689 CCAATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAAGATGCCTCTGC 748 Query 47160 TTTTTTATACATATTCCATATATC 47183 || || ||||| ||||| || || Sbjct 749 CTTCTTGTACATGTTCCAAATGTC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712682850008640