Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031045.1 Length=157855 Score E Sequences producing significant alignments: (Bits) Value seq501 113 5e-20 seq3869 95.1 1e-14 >seq501 Length=12468 Score = 113 bits (124), Expect = 5e-20 Identities = 79/88 (90%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 19041 GGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAGT 19100 |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 4781 GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAGT 4840 Query 19101 CCAGCCAGGGTCACCACTAAATAAACCA 19128 |||| ||||| |||| ||||||| || Sbjct 4841 CCAG-CAGGG--GCCACCAAATAAAACA 4865 >seq3869 Length=8584 Score = 95.1 bits (104), Expect = 1e-14 Identities = 269/407 (66%), Gaps = 10/407 (2%) Strand=Plus/Plus Query 91537 GTTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTTCTCTTCCAATCCACGGTTGTT 91596 ||| ||||| | ||| ||||| || | || | ||||| | || ||||||||||| Sbjct 4362 GTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACCACGGTTGTT 4421 Query 91597 TTTGAGAACAACGACATCATCAAATTGATAATGCCAGAT-GGGAACATAGCATGTTGCCG 91655 ||| || || | | || | || |||||| || ||| | | || ||||||| Sbjct 4422 TTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGA-AGAGGGTTGCCG 4480 Query 91656 ATCCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGGCACCAGTC---AAATACTTGA 91712 || || || | ||||| || ||||| || |||| || ||| |||| |||| Sbjct 4481 CGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCG---GTCTGGAAATGCTTGT 4537 Query 91713 TGAATGGAAC-CAGACCTGTATGGACCATTTCCCCTTTACGGATAGGGCTACCGATGCCA 91771 ||| |||| ||| || || |||| ||| || ||||| ||||| || | | Sbjct 4538 AGAACGGAATGCAG-CCGGTGTGGAAGGCTTCGCCGCCGCGGATCGGGCTGCCCAGCGCG 4596 Query 91772 CGAATTGCCCCAACATCGAATCCGATGCCAGCACGTTTGGAAACATAATCCACGATGCTT 91831 ||||| ||| | | || |||||||| || || | |||||| || | ||| || Sbjct 4597 CGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAATCGCG 4656 Query 91832 TTCGCAGTGGCATTAATTGAGTCCAATGTGTCACCAGTTTTGATCAATACACAAGAGCTG 91891 | | ||||| || || || |||| |||| || | ||||| || || |||||| Sbjct 4657 CTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGAGCTG 4716 Query 91892 AACTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGGTGTTGGAAG 91938 ||||| ||||| ||||| || ||||||||||| || || || || || Sbjct 4717 AACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAG 4763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504829814239800