Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq2516 178 1e-39 seq2261 114 1e-20 seq12517 82.4 8e-11 >seq2516 Length=21774 Score = 178 bits (196), Expect = 1e-39 Identities = 131/153 (86%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 62569 CTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACC 62628 |||||||| ||||| ||| || || ||| ||||||||||||||||||||||||||||| Sbjct 1809 CTGCGTCGCGAAACCCTGCTGGACGCGGTTGAGCATCCGGAAAAATATCCGCAGCTGACC 1868 Query 62629 ATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGAC 62688 || ||||| ||||| || || || ||||| ||||||||||| |||||||||||||||||| Sbjct 1869 ATTCGTGTTTCCGGCTACGCGGTACGCTTCAACTCTCTGACGCCGGAACAGCAGCGCGAC 1928 Query 62689 GTTATCGCTCGTACCTTCACCGAGAGTTTGTAA 62721 || ||||| |||||||| ||||| || ||||| Sbjct 1929 GTAATCGCCCGTACCTTTACCGAAAGCCTGTAA 1961 >seq2261 Length=3986 Score = 114 bits (126), Expect = 1e-20 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 62605 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCT 62664 ||||||||||||||||||||||||||||||||||| || || || || || |||||||| Sbjct 571 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGTTTTAACTCC 630 Query 62665 CTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGTTTGTAAT 62722 ||||| |||||||||| || ||||| | ||||||||||| ||| |||||| Sbjct 631 CTGACCAAAGAACAGCAGCAGGATGTTATTACCCGTACCTTCACTCAGACCATGTAAT 688 >seq12517 Length=681 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1046 GCGGCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGC 1105 ||| ||||| ||||||||||||| | | ||||||||||| | |||||||||||||||||| Sbjct 67 GCGACAGGAGTTGAACCTGCGACCTCCCGCTCCCAAAGCGGGCGCTCTACCAAACTGAGC 126 Query 1106 TAC 1108 ||| Sbjct 127 TAC 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546143232171600