Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031053.1 Length=50934 Score E Sequences producing significant alignments: (Bits) Value seq373 98.7 3e-16 >seq373 Length=63667 Score = 98.7 bits (108), Expect = 3e-16 Identities = 198/294 (67%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 34998 AGAACTATCGTCATTCCATAACCGCGATTTTGATAGTACCCGTCACGCTGGACGGTATTG 35057 ||||| | ||||| | ||| || | || ||||| |||| ||||| || || | | Sbjct 40606 AGAACCACTGTCATGCTATACCCCCTGTTCTGATACGCACCGTTCCGCTGTACCGTCTGG 40547 Query 35058 TTTCTGCGAAAGCTCAAGTCATCATATCTTCTGGCAACTGCAATATCACCTATGAAGCTC 35117 || | ||| || ||| | || || ||| |||| || ||||| ||||| ||||| Sbjct 40546 TTGCGGCGGAAAGTCAGGCTGTCGTAACTTTTGGCCACCGCAATGTCACCAATGAACGAA 40487 Query 35118 TGAGCCTCAATCGTACCCTTGAACGTTCCGCTATTAGCCTCGATATGGCCGCGAACGGTA 35177 | |||| | || || |||| |||||||| || || | ||| || ||| | Sbjct 40486 TCCGCCTGGACAGTGCCACGGAACACGCCGCTATTCGCTTCAACCCTGCCACGGACGATC 40427 Query 35178 ACGTTATTAAACTCAGAACCGCCGTTCTTGTTAATCACCCATCCTTGCTGCCCAGCGATG 35237 |||||||| |||| ||| ||| | |||| || ||| |||||| ||| | | Sbjct 40426 ACGTTATTGAACTGCGAAGAGCCATCCTTGGCGATACGCCAGCCTTGCGAGCCATCAACA 40367 Query 35238 TAGTTGCTGGACTGAATGACGTTACCGATCTTCGCGTTGGTAATCGAACCGTCC 35291 |||| | || | || ||||||||||||||||||| ||||| ||||||||| Sbjct 40366 AAGTTATTCGAGCGGATCTCGTTACCGATCTTCGCGTTCGTAATGGAACCGTCC 40313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162812607627104