Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq4830 430 5e-116 >seq4830 Length=1715 Score = 430 bits (476), Expect = 5e-116 Identities = 870/1278 (68%), Gaps = 45/1278 (4%) Strand=Plus/Plus Query 2319 ATTCTAGAACGCCAGATGGCGCGCTGGTATCAGCTGAAGGACCACGAGGTTCAGCTTCGA 2378 || || || ||||| || | |||||||| | |||||||| ||| ||| || || Sbjct 1 ATGCTTGATCGCCAACTGTCCCGCTGGTACCCACTGAAGGATCACCCGGTGCAACTCGCC 60 Query 2379 CTGTTGCGTGCCGTTGAAGACGGTGTGCGCTTCCCCATTGTGCCCGCAGGACGACGCTCA 2438 ||| || || || || || | ||||| || | ||||||||||| || || Sbjct 61 CTGGTGGCAGCGGTGTCGGAAGGAATTCGCTTTCCACTGGTGCCCGCAGGCCGTCGTAGC 120 Query 2439 GGCAAGACGGAACGCGCCAAGCGTTTTCTG-TCACGTCAGGCGATGTGGTATCCGGGCGA 2497 || ||||| || || |||||| || || | | | ||||| | ||| ||| Sbjct 121 GGAAAGACTGAGCGGTTCAAGCGCTTCGTGGTGAAG-CAGGCATCGGCGTACAGCGGC-- 177 Query 2498 GAAGTATTTCGCAGCCGCGCCCACGTACAACCAGGCCAAGAAGATCTGGTGGGACGACCT 2557 | ||| ||||| || || || ||| || |||||| ||||| |||| ||||| ||||| Sbjct 178 -ATGTACTTCGCCGCGGCACCAACGCACGCCCAGGCGAAGAAAATCTTCTGGGATGACCT 236 Query 2558 CAAGGCGCTGACGCTGTCGTGTATGCACCCCAAGAAGCC--CAG--CGAGTCCGAACTCA 2613 |||||| | ||||| | || |||||| || ||| | | |||||| || || | Sbjct 237 CAAGGCTTTCACGCTCTGCTGCATGCAC----AGTCGCCGGCCGTCCGAGTCGGACCTGA 292 Query 2614 AGATCTACCTGCCCAACGGGACCGAGATTCACATCATCGGTCTGGACCAGGACCAGCCCC 2673 ||||||||| |||||| | |||||| ||| ||||||| || ||| || || | Sbjct 293 TCATCTACCTGGACAACGGTAGCGAGATCCACGTCATCGGGCTCGACAAG------CCGC 346 Query 2674 AGCGGATTGAAGGTATCAACTGGACAGGCGGTGTGATCGACGAAATTGCGGACGTGAAGG 2733 |||||||||| ||||| |||||| ||||| | || |||||| | || ||| | ||| Sbjct 347 AGCGGATTGAGGGTATACCCTGGACTGGCGGGGGCATTGACGAATTCGCCGACATTAAGC 406 Query 2734 GTGAGGCGCTGCAAGCGAACATCATGCCCGCGCTCAACACCGTGAATCCGACGCGCCCGT 2793 || || | | || ||||| | || ||||| ||||| || || || || ||| Sbjct 407 CGGACGCATGGGAGGCAAACATTCTCCCGGCGCTGAACACTGTCAACCCAACCATGCCGG 466 Query 2794 ACTATCGGGCCTGGTGCTGGTTCATTGGTGTGCCCGACGGTCTGAACCACTATTACGACA 2853 | || ||||||||||||||||| | || || || ||||| |||||||||| |||||| Sbjct 467 ATTACCGGGCCTGGTGCTGGTTGCTCGGCGTACCTGACGGCTTGAACCACTACTACGACC 526 Query 2854 TG-GCGGAATATGCACGC----ACCGCCAACGACCCCGACTGGGCGCTGTTCCACTGGAC 2908 || || ||||| || | | ||| ||||| ||| | ||||||| |||| Sbjct 527 TGTGC-----ATGCAGGCCGAATCAGGCAATGACCCAAACTTCCGGGTGTTCCATTGGAA 581 Query 2909 GTCGGAAGAGATTCTCCCGCCAGACGTCATTGAAGCTGCGAAGCGCACCATGTCGCGGAA 2968 |||| |||||||| ||| | ||||| || || || |||||| |||||||| || Sbjct 582 ATCGGCCGAGATTCTTCCGGCTGACGTAATGGACGCAATGAAGCGGGCCATGTCGGCCAA 641 Query 2969 GCAGTACAATCAGGAATATCGAGCGAGCTTCGAGACCGCCAGCGGTCGTATCTATGAGGA 3028 ||||| ||| ||||||| | ||| ||||| || || || || ||||| ||||| Sbjct 642 GCAGTTCAAGCAGGAATTTGAAGCATCGTTCGAAACGGCGTCTGGCCGGATCTACGAGGA 701 Query 3029 CTACTCGAAAGAGAATTTCACAACCGA-GCGG--ATCCTCCCTCACGAAGCGCTGCACTG 3085 |||| |||| ||| ||| ||||| || | || || || || |||| || Sbjct 702 CTACAGCAAAGCGAA---CACCACCGATGCAGCCATTGAGCCGCATGAGCAGCTGATGTG 758 Query 3086 GACGCACGACCAGAACTTCACCCCGCTGAGCTCGGCTATTGTGGTCATCCGCA---ATGG 3142 || ||||||||||||||| || || ||| || || || | ||| |||| |||| Sbjct 759 GATGCACGACCAGAACTTTACGCCTCTGTCATCTGCGATCGGTGTCCGGCGCAACGATGG 818 Query 3143 ---AGTCCCCTTCTTCCTCGATGAGATCGTTCTTGAGAGCGCAGTGAGCCGGCAGTCGGC 3199 || || || | || ||||||||||| || ||||| || ||||||||| Sbjct 819 CAAAGACCTCTATCTGCTGGATGAGATCGTGCTGATCAGCGCTGTTTCGAAGCAGTCGGC 878 Query 3200 AATCGAGTTCGTTGAGAAGTACAAGGAACACAAGAACAAGACAGTCTATATCTACGGTGA 3259 |||||||| || |||| ||||| ||||| |||||| ||| |||||||| || Sbjct 879 TGCTGAGTTCGTGGACAAGTTTAAGGATCACAAAAACAAGCACGTCCTGATCTACGGCGA 938 Query 3260 CCCAGCGGGTCGCGCGGGTGAGAAGCACGGGCACAAATCCGATTACACTGAGATCGAAGA 3319 ||| ||||| || || ||||||||||||||| |||||| ||||| || || || | Sbjct 939 CCCGGCGGGCAAGGCTGGCGAGAAGCACGGGCACGCATCCGACTACACCGACATTGAGGG 998 Query 3320 CGTGCT--ACGCTTGCACGGCTGGAAGTTCGAGCGGCGCGTGCGTCCTGCGCACCCTGCT 3377 |||| | | ||| | ||||||| || | ||| || || ||||| || | Sbjct 999 CGTGTTGAAGGCT--AATGGCTGGACGTACACGCGCAAGGTCAAGCCGGCGCATCCATCC 1056 Query 3378 ATCAAGGACCGCCAGAACGCTGTACGTGCGATGATCTGCAATGCGAAAGGCGAAGTGAGG 3437 || ||||| || |||||||| || || |||| |||| || || ||||||| || Sbjct 1057 ATAAAGGATCGGCAGAACGCCGTCCGGGCGAAGATCCTCACCGCCTCAGGCGAAACCAGC 1116 Query 3438 TTGAAGGTGAATCCTCAGACTGCGCTGTGGTGCCACAAAGGCTTGAGCACTGTGCAGCTC 3497 || | || ||| || || | ||||| ||||| || ||||| || || ||||| Sbjct 1117 CTGTTCATCAACCCTGTCACCGCTCCCTGGTGTCACAAGGGGTTGAGTACGGTTCAGCTT 1176 Query 3498 CAGGCAGGTTCGTCTTTCCAAGAGGATCAAAAGAACCAGTATCAGCACATCACCACAGCG 3557 || || ||| | |||||||| || || || ||| | || |||||||||||||| ||| Sbjct 1177 CAAATGGGCTCGACCTTCCAAGAAGACCAGAAAAACGACTACCAGCACATCACCACGGCG 1236 Query 3558 ATCGGGTATTTTATTGAC 3575 ||||| |||| || ||| Sbjct 1237 ATCGGCTATTGCATCGAC 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187226821345472