Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq12517 82.4 8e-11 seq58 82.4 8e-11 >seq12517 Length=681 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 95712 CCACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTC 95771 || ||||| |||| ||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct 138 CCCCGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTC 79 Query 95772 GAATCCTGTCACCCCGACTCAGC 95794 | ||||||| ||||||| |||| Sbjct 78 AACTCCTGTCGCCCCGACACAGC 56 >seq58 Length=380071 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 100839 TCGATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGAT 100898 || ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||| | | Sbjct 364971 TCAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTT 365030 Query 100899 CGTAACCCGTTCTTCGCTCT 100918 || | | ||| |||||||| Sbjct 365031 CGAATCTCGTCTTTCGCTCT 365050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514842280219400