Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq40 96.9 1e-15 >seq40 Length=14228 Score = 96.9 bits (106), Expect = 1e-15 Identities = 283/431 (66%), Gaps = 14/431 (3%) Strand=Plus/Minus Query 10019 AAACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCC 10078 |||||| | || || || ||||||||||| || ||||| |||||||| | ||||| || Sbjct 975 AAACTGCGTGTTACGTTCGCCCTGGACTGTTGCGATCGTGAAGCCATAGACTGGGCCGCA 916 Query 10079 AGCCCGACCGGCTAC-----AGCGGCGATGACATACGCGACTTGATGCTGGAAAGCG-TG 10132 ||| || || ||| |||| | || | || | ||| | | | ||| | Sbjct 915 AGCACGGGAGGTTACGATAAAGCGACAGTG-----CAGGATGTCATGTTAGGA-GCGATA 862 Query 10133 GAGAAGCGTTTTGGCGACCTACTGCCG-ACCACACCGGTGCAATGGCTAAGCGATAACGG 10191 || || || |||||||| | | ||| | || || | || ||||| | |||||||| Sbjct 861 GAAAAACGCTTTGGCGATAAAGTACCGGAACAGTCCA-TCCAGTGGCTGACAGATAACGG 803 Query 10192 TTCGGCCTACATCGCTGAACAGACGCGCCTGTTTGCTCGACAGATTGGCCTACAGCCAGT 10251 ||| || || | || | | || || | ||| || || || | || |||| Sbjct 802 TTCAGCGTATAGAGCGCATGAAACACGGCAGTTCGCCAGAGAGTTGAATCTGGAGCCCTG 743 Query 10252 GACCACGCCGGTACGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAAT 10311 || ||| | | |||| || ||||| || || |||||||| || ||||| || || || Sbjct 742 CACAACGGCAATCAGCAGTCCTCAGAGTAATGGAATGGCAGAAAGGTTCGTGAAAACGAT 683 Query 10312 CAAGCGCGACTACGTGGCGCACATGCCCAAGCCGGATCGAGAGACAGCCTTGCGCAACCT 10371 ||| |||||| | ||| |||||| || ||| || | || || |||| || || Sbjct 682 GAAGGAAGACTACATCGCGTTCATGCCGAAACCGAATGTAAGAACGGCATTGCATAATCT 623 Query 10372 GACGATTGCCTTCGAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTC 10431 | | || |||| |||||||| || | ||||||||||| || || || ||||| Sbjct 622 TGCAGTGGCGATCGAACATTACAATGAAAACCATCCGCACAGTGCGCTGGGTTATCGCTC 563 Query 10432 GCCGAGGGAAT 10442 ||| | |||| Sbjct 562 TCCGCGAGAAT 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138318420724386