Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq2516 226 3e-54 seq2261 132 5e-26 >seq2516 Length=21774 Score = 226 bits (250), Expect = 3e-54 Identities = 154/173 (89%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 47305 GAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTT 47364 |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| Sbjct 1779 GAAGGCGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACCCTGCTGGACGCGGTT 1838 Query 47365 GAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTC 47424 ||||| || |||||||| ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct 1839 GAGCATCCGGAAAAATATCCGCAGCTGACCATTCGTGTTTCCGGCTACGCGGTACGCTTC 1898 Query 47425 AACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCACAGA 47477 ||||| |||| || ||||||||||||||||| ||||| ||||| || || || Sbjct 1899 AACTCTCTGACGCCGGAACAGCAGCGCGACGTAATCGCCCGTACCTTTACCGA 1951 >seq2261 Length=3986 Score = 132 bits (146), Expect = 5e-26 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 47302 ATTGAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCG 47361 || ||||| ||||||||||||||||| ||||| || ||||||| |||| || ||| Sbjct 502 ATCGAAGGTGGTCAGCACCTGAACGTGAACGTCATGAACCGCGAAATGCTGCTCGACGCG 561 Query 47362 GTTGAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGC 47421 | || |||| |||||||| ||||||||||| || || || || || ||||| || || Sbjct 562 ATGGAAAACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCCGTACGT 621 Query 47422 TTCAACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCAC 47474 || |||||| |||| ||||||||||| || ||||| | ||||| ||||| Sbjct 622 TTTAACTCCCTGACCAAAGAACAGCAGCAGGATGTTATTACCCGTACCTTCAC 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539707103880560