Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq2100 122 1e-22 seq345 93.3 7e-14 seq347 89.7 8e-13 >seq2100 Length=19628 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 200501 ATGGTGAGTTAGGGCCTGTGTATGGTAAGCAGTGGCGTGATTGGATCGGGCCAGATGGTC 200560 |||| || | ||||| || || || || ||||||||| ||| | ||| ||||| | Sbjct 19328 ATGGCGACCTGGGGCCGGTCTACGGCAAACAGTGGCGTTCCTGGCCTGCGCCGGATGGCC 19387 Query 200561 AACACCACGACCAAATCAGCACGGTCATCGACCAGCTACGTAATGATCCGGACAGTCGTC 200620 || |||||| ||||||||||| || ||||||| || || |||||| || | Sbjct 19388 GCCATATCGACCAGATCAGCACGGTGATGAACCAGCTGAAAAACGACCCGGACTCCCGCC 19447 Query 200621 GCATTATCGTTAGTGCATGGAATGTGGGTGAGTTGGATAAAATGGCTTTAGCGCCTTGCC 200680 | || ||||| |||||||| || || ||| ||||||||||||| | ||||| |||| Sbjct 19448 GGATCATCGTCTCGGCATGGAACGTCGGCGAGCTGGATAAAATGGCGCTGGCGCCGTGCC 19507 Query 200681 ATTCCTTCTTCCAGTTCTAC 200700 | ||||||||||||||||| Sbjct 19508 ACGCCTTCTTCCAGTTCTAC 19527 >seq345 Length=175672 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 200098 GACCGTACCGGTANNNNNACCACGT-CTATTTTCGGTGCACAGATGCGCTTCAATCTACA 200156 ||||||||||| | || |||| | ||||||| |||||||| ||| |||| Sbjct 150405 GACCGTACCGGGACAGGCAC-ACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTGTC 150463 Query 200157 AGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCACGAGCT 200216 | || || || ||||||||||||| |||||| |||||||| |||||||| Sbjct 150464 GGCGGGTTTTCCTGCCCTGACGACCAAGAAACTGCATCTCAAATCCATCATCCACGAGCT 150523 Query 200217 GTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGATAACAATGTCACCAT 200276 | |||||||||| || || || || || ||| ||||| || || ||| || || || Sbjct 150524 GCTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGACGAT 150583 Query 200277 TTGGGACGAATGGGC 200291 ||||| |||||||| Sbjct 150584 CTGGGATGAATGGGC 150598 >seq347 Length=20085 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 976 TAGGGAAGTAGCTCAGCAGGCAGAGCGCTGGTCTCCAAAACCAGATGTCGCAGGTTCGAT 1035 ||||| |||||||||| || |||||| ||||||||||||| | ||||||||||||| Sbjct 16292 TAGGGGAGTAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCGCAGGTTCGAA 16233 Query 1036 TCCTGTCTTCCCTGCCA 1052 |||||||| |||||||| Sbjct 16232 TCCTGTCTCCCCTGCCA 16216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783083601216000