Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq19823 107 1e-18 >seq19823 Length=496 Score = 107 bits (118), Expect = 1e-18 Identities = 240/351 (68%), Gaps = 12/351 (3%) Strand=Plus/Minus Query 47037 GCGCATCAACTGCCACCACAACTACACCGAGAACGTCACGATCAACGGCGAGAGGGTGTG 47096 ||||||||||||||||||||||| ||||||| | | | | |||| || |||||| Sbjct 365 GCGCATCAACTGCCACCACAACTTCACCGAGTCGGAGAAGCACTACGGGAAGCAGGTGTG 306 Query 47097 GCTGACGCGCAAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTC 47156 | || | || ||||| || ||| | || || || || ||||||||||| || Sbjct 305 GGTGTCACGGAAGGGAGCCATCCAGGCGGACGCCGGTCGACCGGGCCTCATCCCCGGGTC 246 Query 47157 CATGGGCACCAAGTCGTACGTCGTTGTGGGGCAGGGGAATTCGTCTGGC-CTATACTCGG 47215 ||||| ||| || ||||| || | |||| || | || | | | || |||| Sbjct 245 GATGGGGACCGCCTCTTACGTGGTGGAAGGGCTCGGCGACCCG-CAGTCGCTGAACTCCT 187 Query 47216 CACCACATGGGGCTGGCCGGAACTTCTCTCGCACCGAGGCTCGCAAGCGG---TTCACTG 47272 | || || || || || ||| | | ||| ||| | | ||| || |||| ||||| Sbjct 186 CCCCGCACGGTGCCGGACGGGAGTACTCCCGCTCGGCGGCGCG---GCGGACCTTCACGC 130 Query 47273 CGGACGACCTCGCGA-AGGCCATGGAGGGCATCGAGTACCGCCACGGTGAGGAGTGGATC 47331 ||| | || |||| |||| ||| ||||||||||| ||| || || | | ||| Sbjct 129 ACGACCAGCT-GCGAGAGGCGATGACGGGCATCGAGTTCCGTGACACCGATGCCTTCATC 71 Query 47332 GACGAGATCCCCGCA-GCGTACAAGGACATCGACCAGGTCATCGAGGACGC 47381 |||||||| |||||| ||||||||| ||||||||||| || | ||| || Sbjct 70 GACGAGAT-CCCGCAGGCGTACAAGCCGATCGACCAGGTGATGGCGGATGC 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313802409623259