Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq19411 104 3e-17 seq12517 98.7 1e-15 seq501 84.2 3e-11 >seq19411 Length=388 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19646 CACGGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCG 19705 ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 37 CACGGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCG 96 Query 19706 AGTCTCCTATTCTCC 19720 | ||||||| |||| Sbjct 97 AATCTCCTAGGCTCC 111 >seq12517 Length=681 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 167483 CGGGGCGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAA 167542 |||||||||||||||||||||||||| | ||||||||||||| | || || |||||||| Sbjct 135 CGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAC 76 Query 167543 TCCTATCGCCCCGA 167556 |||| ||||||||| Sbjct 75 TCCTGTCGCCCCGA 62 >seq501 Length=12468 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 |||||||| ||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 11103 TAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCTGT 11045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621850910235240