Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq3869 145 8e-30 >seq3869 Length=8584 Score = 145 bits (160), Expect = 8e-30 Identities = 278/410 (68%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 142448 CATCAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACC 142507 |||||| | ||| | ||| | ||||||||||| ||||||| ||||| | ||| ||| Sbjct 4353 CATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACC 4412 Query 142508 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 142567 |||||||||||| || ||||| |||| ||||||| |||||| || || || | Sbjct 4413 ACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAG 4472 Query 142568 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 142627 || || |||||||| || | || || || || || ||||| || || ||||||||||| Sbjct 4473 GGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATG 4532 Query 142628 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 142687 || |||| ||||| ||||| || | ||||||| || || | || Sbjct 4533 CTTGTAGAACGGAATGCAGCCGGTGTGGAAGGCTTCGCCGCCGCGGATCGGGCTGCCCAG 4592 Query 142688 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 142747 || ||||| || ||||||| || || || || || | |||| ||||| | || Sbjct 4593 CGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAAT 4652 Query 142748 TGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGA 142807 | | | | || ||| || || | ||| ||||||| || || | ||| || || Sbjct 4653 CGCGCTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGA 4712 Query 142808 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGGCA 142857 || || ||||||||||| ||||| | || | ||| || || || |||| Sbjct 4713 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCA 4762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540254110807880