Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1351 134 1e-26 seq3382 127 1e-24 seq3381 125 5e-24 seq8653 123 2e-23 seq4240 122 6e-23 seq13839 86.0 5e-12 >seq1351 Length=12664 Score = 134 bits (148), Expect = 1e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||||||||| |||||||| || |||| ||| | || || Sbjct 4684 ACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTCA 4625 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||||||||| ||||| || | || | ||| ||||| ||| Sbjct 4624 AGTTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGG 4565 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | |||||||||| || ||||| | || || ||||| Sbjct 4564 ATCTTGNNCTTGAC-GTTCTCGATGGTGTCGGATCCCTCGACCTCGAGGGTGATGGTCTT 4506 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 4505 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 4476 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||| ||||||||| |||||||| || |||| ||| | || || Sbjct 4913 CACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTC 4854 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||||||||| | ||||||||| || | || | ||| ||||| || Sbjct 4853 AAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG 4794 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | |||||||||| || ||||||| || || |||| Sbjct 4793 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGGATCCCTCGACCTCCAGAGTGATGGTCT 4735 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || |||||||| ||||||||||| Sbjct 4734 TTCCAGTTAGAGTCTTCACAAAGATTTGCAT 4704 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||| |||| |||||| ||| ||||||||| ||||| || ||| | || ||| Sbjct 5149 AGTCTCAATACCAAGTGAAGGGTGGACTCCTTTTGAATGTTATAGTCGCCAAGAGTGCGA 5090 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || |||||||| ||||||||||| | ||||||||| || | || | || ||| Sbjct 5089 CCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCC 5030 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || || ||||| ||| | |||| | |||||||| | | || ||||| | || Sbjct 5029 TTGTCTTGAATCTTGGCCTTGAC-GTTCTCGATGGTGTCAGAGCCCTCAACCTCAAGTGT 4971 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || ||||||||||| |||||||| ||||| Sbjct 4970 GATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4932 >seq3382 Length=4522 Score = 127 bits (140), Expect = 1e-24 Identities = 162/219 (74%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||| |||||||||||||||||| || | ||| || |||| || Sbjct 4162 CACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTC 4103 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| ||||||||||| | ||||||||| || | || | || ||||| || Sbjct 4102 CAACTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTG 4043 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||| |||| || ||||| | || || |||| Sbjct 4042 GATCTTGGCCTTGAC-GTTCTCGATGGTATCGGAACCCTCAACCTCAAGGGTGATGGTCT 3984 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAA 44345 |||| || || ||||| ||||| ||||||||||| |||| Sbjct 3983 TTCCGGTCAGAGTCTTGACGAAAATTTGCATGAT-TGAA 3946 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||| ||||| || | ||| || | || |||| |||||| |||||||| Sbjct 4372 CTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCGGCAAA 4313 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| || | || | || ||||| ||| ||||| ||| | | Sbjct 4312 GATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 4253 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||||| || ||||| | || || ||||| || ||||||||||| || Sbjct 4252 TTCAATGGTGTCGGATCCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 4193 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 4192 GAAGATCTGCAT 4181 >seq3381 Length=12314 Score = 125 bits (138), Expect = 5e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||||| | || || ||||| ||| ||| || ||||||||||| || Sbjct 961 CATACCTCCTCGCAGTCTGAGGACGAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 902 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||| ||| | || || |||||||| || |||||||| | |||||||||||| | Sbjct 901 ACCGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCGGG 842 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| || ||||| ||| | || | || ||||||| | || Sbjct 841 TGGGATACCCTCCTTATCTTGGATCTTAGCCTTAACATTTTCAATAGTGTCGGAGCCCTC 782 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || || | ||||| || |||||||||||| Sbjct 781 AACCTCCAGTGTGATGGTCTTGCCAGTCAAAGTCTTAACAAAGATTTGCATG 730 Score = 122 bits (134), Expect = 6e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | |||| ||| || || ||||||||||||||||| ||| | || ||| Sbjct 1632 AGTCTGAGAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCCAAGAGTGCGG 1573 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || |||||||| || |||||||||||||||||||| || | || | ||| ||| Sbjct 1572 CCATCCTCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGTGGGATACCCTCC 1513 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || || ||||| ||| | | |||| | ||||| || | | ||| ||||| | || Sbjct 1512 TTATCTTGGATCTT-TGCCTTTACGTTCTCAATGGTATCAGAGCCTTCAACCTCGAGAGT 1454 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || || ||||| |||||||| ||||| Sbjct 1453 GATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 1415 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||||| | |||| |||||| ||| ||| || ||||||||||| Sbjct 1192 TTGCATACCACCACGGAGTCTAAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTA 1133 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || |||| || | || |||| ||||| || ||||| || | ||||||||| || Sbjct 1132 GTCACCGAGGGTACGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGCTGGTC 1073 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||||||||| || ||||| ||| | | | |||||||| | | Sbjct 1072 GGGTGGAATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCAATGGTGTCCGAGCC 1013 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || |||||||| || ||||| ||||| || ||||| ||||| Sbjct 1012 CTCAACCTCAAGAGTGATCGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 959 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | |||| ||| || || |||||||| |||||||| || Sbjct 1417 CATACCTCCACGGAGTCTGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTC 1358 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || || | || || || ||||| ||||||||||| | ||| |||||||| | Sbjct 1357 GCCAAGAGTACGACCATCCTCGAGTTGCTTGCCGGCAAAGATGAGACGTTGCTGATCGGG 1298 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| ||||| || ||||| || | | |||| | || || || | | Sbjct 1297 TGGGATACCCTCCTTATCTTGGATCTT-GGCCTTGACGTTCTCGATAGTATCCGAACCCT 1239 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | || || |||||||| || | |||||||| ||||||||||| Sbjct 1238 CAACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTCTTCACAAAGATTTGCAT 1187 >seq8653 Length=1535 Score = 123 bits (136), Expect = 2e-23 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || ||||| ||| || || |||||| || |||||||| || Sbjct 190 CATTCCTCCACGGAGACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 249 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | |||| ||| |||| || || ||||| ||||||||||||||||| || ||||| | Sbjct 250 GCCGAGAGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGTTGATCGGG 309 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||| || || ||||| ||| | | |||| | || ||||| | | | Sbjct 310 TGGGATACCTTCTTTGTCTTGAATCTT-TGCCTTGACGTTCTCGATAGTGTCAGAGCCCT 368 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | ||||| | || || |||||||| || | ||||| || ||||||||||| || Sbjct 369 CGACCTCTAGTGTGATGGTCTTTCCAGTCAATGTCTTTACAAAGATTTGCATTAT 423 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || |||||||| || |||| || | || || |||||||| |||||||| Sbjct 1 CTCCTTCTGAATGTTGTAGTCACCGAGGGTACGACCATCCTCGAGCTGCTTGCCGGCAAA 60 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||||||||| | || | || ||||| || ||||| || | | || Sbjct 61 GATGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTATCTTGGATCTT-GGCCTTGACGT 119 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | || ||||| | || || ||||| || ||||| ||||||| Sbjct 120 TCTCGATAGTGTCAGAGCCCTCAACCTCGAGGGTGATAGTCTTGCCAGTGAGAGTCTTCA 179 Query 44325 CGAAGATTTGCAT 44337 | ||||| ||||| Sbjct 180 CAAAGATCTGCAT 192 >seq4240 Length=2116 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||| |||||| || || ||||| || | ||| ||| |||| || Sbjct 1652 CACCAAGTGAAGGGTGGACTCCTTCTGAATATTGTAGTCAGAGAGAGTGCGACCGTCCTC 1593 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||||||||| | ||||||||| || | || | || ||||| ||| Sbjct 1592 GAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTG 1533 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || | | |||| | |||||||| | | ||| ||||| | || || |||| Sbjct 1532 GATCTT-GGCCTTGACGTTCTCGATGGTGTCAGAGCCTTCGACCTCAAGGGTGATGGTCT 1474 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || | ||||| |||||||| ||||| Sbjct 1473 TTCCAGTCAAAGTCTTGACGAAGATCTGCAT 1443 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||| ||||| || | ||| || | || |||| |||||| |||||||| Sbjct 1406 CTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCGGCAAA 1347 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| || | || | || ||||| ||| ||||| || | | || Sbjct 1346 GATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTT-GGCCTTGACGT 1288 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | |||||||| | | || ||||| | ||||| ||||| || ||||| || || | Sbjct 1287 TCTCGATGGTGTCCGAGCCCTCGACCTCAAGGGTAATAGTCTTACCAGTGAGTGTTTTTA 1228 Query 44325 CGAAGATTTGCAT 44337 |||| || ||||| Sbjct 1227 CGAAAATCTGCAT 1215 >seq13839 Length=228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||| ||||||||| |||||||| || |||| ||| | || || Sbjct 139 CACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTC 80 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||||||| ||||||||||| | ||||||||| || | || | || ||||| || Sbjct 79 AAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359866557340059