Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1285 122 2e-22 seq1539 113 1e-19 seq947 102 2e-16 seq933 102 2e-16 seq914 102 2e-16 seq704 98.7 2e-15 seq1543 96.9 7e-15 seq1506 96.9 7e-15 seq1419 96.9 7e-15 seq1287 96.9 7e-15 seq960 96.9 7e-15 seq801 96.9 7e-15 seq797 96.9 7e-15 seq783 96.9 7e-15 seq579 96.9 7e-15 seq476 96.9 7e-15 seq429 96.9 7e-15 seq378 96.9 7e-15 seq206 96.9 7e-15 seq156 96.9 7e-15 seq15 96.9 7e-15 >seq1285 Length=126460 Score = 122 bits (134), Expect = 2e-22 Identities = 260/384 (68%), Gaps = 7/384 (2%) Strand=Plus/Minus Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 || || |||||||||||| || ||| | ||| | |||||||| || || | |||| Sbjct 51340 TTTTGTGCCATCTTTTGGTTGAAGAAGAGAGGCCTCATGCCTGGACTTTGTTTCAGTAAC 51281 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| ||||| | |||||||| | || | || | | || | || | | Sbjct 51280 GAGCAGATCAGCAGGGACGAGGGCATGCACTGCGACTTTGCCTGCCTCCTCTACAACATG 51221 Query 230350 CTCCAGAACAAGCTACCATTCGA-GACGGT--CAAACAA-ATCATTACAGAAGCAGTTGA 230405 ||||||||| ||| | | | ||| || | | ||| || ||| | || || || || Sbjct 51220 ATCCAGAACAG---ACCCTCCAACGACTGTGCCCACCAAGATTATTGCTGAGGCTGTGGA 51164 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | ||||||||||| | | || | ||||| | || || ||||||||||| || Sbjct 51163 GATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGGCTCATCGGCATGAACGCCGA 51104 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| | |||||||| || || || || |||||| | | || || || || | ||| Sbjct 51103 GCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTGGTGGCCCTCGGCTGCGA 51044 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| | |||||| ||| |||||| |||| | ||||||||||| || | |||| || Sbjct 51043 GAAGATCTACAACGCTACGAACCCGTTTGACTGGATGGAGCTCATCTCCTTGGAAGGCAA 50984 Query 230586 GACCAACTTCTTCGAAAAGCGTGT 230609 ||||||||| ||||| | ||| || Sbjct 50983 GACCAACTTTTTCGAGAGGCGCGT 50960 >seq1539 Length=27205 Score = 113 bits (124), Expect = 1e-19 Identities = 257/382 (67%), Gaps = 6/382 (2%) Strand=Plus/Plus Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 || || |||||||||||| || ||| | ||| | |||||||| || || | ||| Sbjct 26151 TTTTGTGCCATCTTTTGGTTGAAGAAGAGAGGCCTTATGCCTGGACTTTGTTTCAGTAAT 26210 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| ||||| | |||||||| | || | || | | || | || | | Sbjct 26211 GAGCAGATCAGCAGGGACGAGGGCATGCACTGTGACTTTGCCTGCCTCCTCTACAACATG 26270 Query 230350 CTCCAGAACA-AGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAA 230408 ||||||||| | | ||| ||| | | || | |||||| | ||||| || || | Sbjct 26271 ATCCAGAACAGACCCTCCAA-CGACATGCCCACCAAGATCATTGCTGAAGCCGTGGAGAT 26329 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 || |||||||| | | || | ||||| | || || ||||||||||| || || Sbjct 26330 TGAGAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGGCTCATCGGCATGAACGCCGAGCT 26389 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | |||||||| || || || || |||||| | | || || || || | |||||| Sbjct 26390 CATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTGGTGGCCCTCGGCTGCGAGAA 26449 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTT-CAAGGGAAGA 230587 | |||||| ||| |||||| |||| | ||||||||| || ||| |||| |||| Sbjct 26450 GATCTACAACGCTACGAACCCGTTTGACTGGATGGAGCTC---TCCCTTGGAAGGCAAGA 26506 Query 230588 CCAACTTCTTCGAAAAGCGTGT 230609 ||||||| ||||| | ||| || Sbjct 26507 CCAACTTTTTCGAGAGGCGCGT 26528 >seq947 Length=286248 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 28258 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 28317 Query 165776 ATGGGC 165781 |||| Sbjct 28318 GGGGGC 28323 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 28942 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 28883 Query 165776 ATGGGC 165781 |||| Sbjct 28882 GGGGGC 28877 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 33270 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 33329 Query 165776 ATGGGC 165781 |||| Sbjct 33330 GGGGGC 33335 >seq933 Length=369102 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 263359 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 263300 Query 165776 ATGGGC 165781 |||| Sbjct 263299 GAGGGC 263294 >seq914 Length=132171 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 124162 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 124103 Query 165776 ATGGGC 165781 |||| Sbjct 124102 GGGGGC 124097 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 128574 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 128633 Query 165776 ATGGGC 165781 |||| Sbjct 128634 GGGGGC 128639 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 129054 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 128995 Query 165776 ATGGGC 165781 |||| Sbjct 128994 GGGGGC 128989 >seq704 Length=164225 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/73 (90%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 165703 AACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGG 165762 ||||| ||| | ||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 58391 AACGC--GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGG 58448 Query 165763 TTCGAGCCCCACG 165775 ||||||||||||| Sbjct 58449 TTCGAGCCCCACG 58461 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 129446 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 129387 Query 165770 CCCACG 165775 |||||| Sbjct 129386 CCCACG 129381 >seq1543 Length=67254 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 24441 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 24500 Query 165770 CCCACG 165775 |||||| Sbjct 24501 CCCACG 24506 >seq1506 Length=73002 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 32678 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 32619 Query 165770 CCCACG 165775 |||||| Sbjct 32618 CCCACG 32613 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 66803 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 66744 Query 165770 CCCACG 165775 |||||| Sbjct 66743 CCCACG 66738 >seq1419 Length=129607 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 122028 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 121969 Query 165776 ATGGGC 165781 | ||| Sbjct 121968 CTTGGC 121963 >seq1287 Length=27539 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 10966 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 10907 Query 165770 CCCACG 165775 |||||| Sbjct 10906 CCCACG 10901 >seq960 Length=79466 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 50805 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 50746 Query 165770 CCCACG 165775 |||||| Sbjct 50745 CCCACG 50740 >seq801 Length=482332 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 307656 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 307597 Query 165770 CCCACG 165775 |||||| Sbjct 307596 CCCACG 307591 >seq797 Length=73911 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 47799 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 47858 Query 165770 CCCACG 165775 |||||| Sbjct 47859 CCCACG 47864 >seq783 Length=132342 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 59439 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 59380 Query 165776 ATGGGC 165781 | ||| Sbjct 59379 CTTGGC 59374 >seq579 Length=398357 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 14517 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 14576 Query 165770 CCCACG 165775 |||||| Sbjct 14577 CCCACG 14582 >seq476 Length=8039 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 7153 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 7212 Query 165776 ATGGGC 165781 | ||| Sbjct 7213 CTTGGC 7218 >seq429 Length=8749 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 6558 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 6499 Query 165776 ATGGGC 165781 | ||| Sbjct 6498 CTTGGC 6493 >seq378 Length=15985 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 4920 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 4979 Query 165770 CCCACG 165775 |||||| Sbjct 4980 CCCACG 4985 >seq206 Length=21391 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 2422 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 2363 Query 165776 ATGGGC 165781 | ||| Sbjct 2362 CTTGGC 2357 >seq156 Length=26647 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 4493 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 4434 Query 165770 CCCACG 165775 |||||| Sbjct 4433 CCCACG 4428 >seq15 Length=31504 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 11118 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 11059 Query 165770 CCCACG 165775 |||||| Sbjct 11058 CCCACG 11053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057802246841150