Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1057 183 3e-41 >seq1057 Length=235048 Score = 183 bits (202), Expect = 3e-41 Identities = 485/731 (66%), Gaps = 11/731 (2%) Strand=Plus/Plus Query 16696 TTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGT 16755 ||| || | ||| | ||||| ||| | ||| ||| |||||| ||| || |||||| Sbjct 119530 TTCAAACATGTTGGCTTTGCTCTCCAAAGAGATAAGCTCCATCCAATAGAATGGATTAAC 119589 Query 16756 AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTAT 16815 ||| ||| | || | | || || | | || | | |||||| ||||| ||||| Sbjct 119590 GGCTTCAAAGAGCTTCTTGCATCCAAGAGCCACCATAAGCCGATCCGCCACAAACTCTAT 119649 Query 16816 ATATTGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCA 16874 ||| |||||||| | || ||| ||||| || || || || || ||||||| || | | Sbjct 119650 ATACTGGCACATGAGCTCCGCA-TTCATGCCGATGAGTCGAACAGGAAGAGACTCGGAAA 119708 Query 16875 AAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC 16933 ||| || || ||| | |||| |||||| ||| || | | | ||||| | | Sbjct 119709 CAAACTCCTT-CTCGACGTCAACAGCTTCCGCAATGATCCGACGGATGATCTCCTCTGGC 119767 Query 16934 GGTGTATGT-TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTC 16992 ||| | | |||| || || || || ||| || || || ||||| | || || || Sbjct 119768 GGTTTTTCCCTTAACATACCGAA-CAGCATACAAGCAAAGTCACAATGCATGCCTTCATC 119826 Query 16993 TCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCA 17052 |||| || || ||||| || | | || |||||| |||| |||||| | ||| Sbjct 119827 CTTGCTTATGAGCTCGTTGCTGAAGCTGAGTCCAGGCATCAGCCCTCTTTTCTTCAGCCA 119886 Query 17053 AAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAA 17112 || || ||| ||| || || || ||||| || || || || | ||||| ||||| | Sbjct 119887 GAAGATGGCGCAGAAGGAACCCGAGAAGAAGATGCCTTCCACTGCGGCAAAGGCGATGAG 119946 Query 17113 TCGTTCGGCGTACG-TCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT 17171 || || | | | | | |||| || |||| | || |||| ||||| || | Sbjct 119947 CCGCAGAGCAAAAGCTTGTGGCTTTTCTA----TCCAACGCAGCGCCCATTCGGCCTTCT 120002 Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGA 17231 ||| | || | || ||| || ||||| ||||| | || | ||||| | | ||| Sbjct 120003 TCTTCACGCTAGGCACCGTCTCAATGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTT 120062 Query 17232 TTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCT 17291 | | || || |||||||| || |||||| || ||||| |||||||||||||| || | Sbjct 120063 TGACGTAGGTGTCGATGAGCAGCGAGTACATCTCCGAGTGGATGTTCTCCATGGCGATTT 120122 Query 17292 GAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTA 17351 |||| ||||| ||||| || || |||| | |||||||||| ||| || | || | Sbjct 120123 GAAAGCCGTAGAAGCAACGTGCCTCCGGCAGTTGAACTTCCTTCATGAAGCGGGCAGCAA 120182 Query 17352 GATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAAT 17411 | || || ||||||||| || || |||||||| ||||| | ||||| || || | Sbjct 120183 GGTTCTCCACCACGATGCCATCCGAGGCAGCGAAAAAGGCCAACACGTGCTTGATAAAGT 120242 Query 17412 ATTTTTCGTCC 17422 ||||||| Sbjct 120243 GGCGTTCGTCC 120253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517535216741400