Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1057 150 2e-31 >seq1057 Length=235048 Score = 150 bits (166), Expect = 2e-31 Identities = 307/454 (68%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| || || || || |||| || || || | || || | ||||| Sbjct 119789 AACAGCATACAAGCAAAGTCACAATGCATGCCTTCATCCTTGCTTATGAGCTCGTTGCTG 119848 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||||| ||||| || || | || || ||||| || |||| ||| || || Sbjct 119849 AAGCTGAGTCCAGGCATCAGCCCTCTTTTCTTCAGCCAGAAGATGGCGCAGAAGGAACCC 119908 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC--GGCGC 33750 || |||||||| ||||| ||||| |||||||| || || | | || || | | || Sbjct 119909 GAGAAGAAGATGCCTTCCACTGCGGCAAAGGCGATGAGCCGCAGAGCAAAAGCTTGTGGC 119968 Query 33751 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | | | |||||| | ||||| ||||||||||| || || | ||||| ||| || | Sbjct 119969 TTT--TCTATCCAACGCAGCGCCCATTCGGCCTTCTTCTTCACGCTAGGCACCGTCTCAA 120026 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 |||| |||||||| | ||||| || ||||| || || || ||||| | || Sbjct 120027 TGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTTTGACGTAGGTGTCGATGAGCAGCG 120086 Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930 ||||| ||||| || ||||| || ||||| || ||||| |||||||| || | |||| Sbjct 120087 AGTACATCTCCGAGTGGATGTTCTCCATGGCGATTTGAAAGCCGTAGAAGCAACGTGCCT 120146 Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCAC 33990 | | | || ||||| | || || | || | || || ||| || ||||| Sbjct 120147 CCGGCAGTTGAACTTCCTTCATGAAGCGGGCAGCAAGGTTCTCCACCACGATGCCATCCG 120206 Query 33991 TGGCTGCAAAAAACGCCAATACATGTTTTATAAA 34024 ||| || ||||| ||||| || || || ||||| Sbjct 120207 AGGCAGCGAAAAAGGCCAACACGTGCTTGATAAA 120240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629804964284400