Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1090 98.7 8e-16 seq372 93.3 4e-14 seq1129 91.5 1e-13 seq942 91.5 1e-13 seq753 89.7 4e-13 seq1391 84.2 2e-11 seq976 84.2 2e-11 seq2 84.2 2e-11 seq151 82.4 6e-11 >seq1090 Length=245726 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || |||||||| || || ||||| || |||| || | |||||||| Sbjct 123716 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 123657 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || |||||| | || || | ||||||||| || | ||| || ||||| Sbjct 123656 AGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGG 123597 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || ||| |||| ||| | ||||||||| || Sbjct 123596 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAAGGTAATGGTCTTG 123537 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||| ||||| ||||| ||||| Sbjct 123536 CCGGTAAGAGTCTTGACGAAAATCTGCAT 123508 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || |||||||| || || ||||| || |||| || | |||||||| Sbjct 31229 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 31170 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || ||| | || || | |||||| || ||| | |||||| ||||| Sbjct 31169 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 31110 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || ||| |||| || | || ||||| || Sbjct 31109 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAGAGTGATGGTCTTG 31050 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| |||||||||||| Sbjct 31049 CCGGTGAGGGTCTTGACGAAAATTTGCATT 31020 >seq372 Length=15075 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | |||||||||||||| || ||||| || |||| || | | |||||| Sbjct 1420 ACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCC 1479 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || || | || | || ||||| || || | ||| || ||||| Sbjct 1480 AGCTGCTTGCCAGCGAAGATCAATCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 1539 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGG-CTCCGTTTCGACGGTAATGGTTTT 19011 || ||||| || || | ||| || || | ||| |||| ||||| ||| |||||||| Sbjct 1540 ATCTTCTGCTTCACGTTCTCGATGGTGTC-CGAGGACTCCACTTCGAGGGTGATGGTTTT 1598 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || ||||| ||||| || || ||||| Sbjct 1599 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 1628 >seq1129 Length=232510 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || |||||||| |||||||||||||| || | || | |||||||| Sbjct 106759 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCGAGAGTGCGGCCGTCCTCC 106700 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || || | || || | |||||| || ||| | ||| || ||||| Sbjct 106699 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 106640 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || || || |||| || | ||| ||||| || Sbjct 106639 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 106580 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| || ||||||||| Sbjct 106579 CCAGTGAGGGTCTTGACGAAGATTTGCATT 106550 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889 ||||||| ||| | || ||||||||||| || ||||| || |||| || | ||||| Sbjct 106990 AACACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCC 106931 Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949 |||||||| ||||| || | || | | ||||||||| || | || || ||||| Sbjct 106930 TCCAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATACCTTCCTTGTCC 106871 Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009 || || || || || | | | |||||| || ||| || | || |||||| Sbjct 106870 TGGATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTT 106811 Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || || ||||| ||||| || || ||||| Sbjct 106810 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 106779 >seq942 Length=135290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||||||||| || || ||||| || || | || | |||||||| Sbjct 52847 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCC 52788 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || || | || | | ||||| ||| ||| | ||| || ||||| Sbjct 52787 AGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 52728 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || |||||||| || | ||| || || || |||| ||||| || ||||| || Sbjct 52727 ATCTTCTGTTTCACGTTCTCGATGGTGTCCGAAGACTCCACTTCGAGAGTGATGGTCTTT 52668 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| |||||||||||| Sbjct 52667 CCCGTGAGGGTCTTGACGAAAATTTGCATT 52638 >seq753 Length=293645 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || ||||||||||| || |||||||| |||| || | |||||||| Sbjct 49176 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 49235 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || || | || || | |||||| || ||| | |||||| ||||| Sbjct 49236 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 49295 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || || | ||| || ||| |||| ||| | ||| ||||| || Sbjct 49296 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTTT 49355 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||| ||||| || || ||||| Sbjct 49356 CCGGTAAGAGTCTTGACGAAGATCTGCAT 49384 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||||||||| || || ||||| || |||| || |||||||| Sbjct 49860 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCC 49919 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || ||||| | || | | |||||||| ||| | |||||| ||||| Sbjct 49920 AGCTGCTTGCCCGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 49979 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || || || |||| || | ||| ||||| || Sbjct 49980 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 50039 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| || ||||||||| Sbjct 50040 CCAGTGAGGGTCTTGACGAAGATTTGCATT 50069 >seq1391 Length=76266 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || ||||||||||| || ||||| || |||| || | |||||||| Sbjct 37507 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCC 37566 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || ||| | || || | ||||||||| || | ||| || ||||| Sbjct 37567 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 37626 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || || | ||| || ||| |||| ||| | |||||| || || Sbjct 37627 ATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTG 37686 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||| ||||| || || ||||| Sbjct 37687 CCGGTAAGAGTCTTGACGAAGATCTGCAT 37715 Score = 82.4 bits (90), Expect = 6e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || |||||||| || || ||||| || |||| || | |||||||| Sbjct 37963 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 38022 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || ||| | || || | |||||| || ||| | ||| || ||||| Sbjct 38023 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 38082 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || ||| |||| |||| ||| ||||| || Sbjct 38083 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTT 38142 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| || ||||||||| Sbjct 38143 CC-GTGAGGGTCTTGACGAAGATTTGCATT 38171 >seq976 Length=280112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || |||||||| || || ||||| || |||| || | |||||||| Sbjct 141735 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCC 141676 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || || | || | | |||||| || ||| | |||||| ||||| Sbjct 141675 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGG 141616 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || ||||| || | ||| || ||| |||| ||| | ||| |||||||| Sbjct 141615 ATCTTTTGTTTGACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTTTTG 141556 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || || || ||||| || || ||||| Sbjct 141555 CCAGTCAACGTCTTGACGAAGATCTGCAT 141527 >seq2 Length=914981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||||||||| || || ||||| || |||| || |||||||| Sbjct 65903 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCGTCCTCC 65962 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || ||| | || || | ||||||||| || | ||| || ||||| Sbjct 65963 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGG 66022 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || ||||| || | ||| || ||| |||| ||| | |||||| || || Sbjct 66023 ATCTTTTGTTTGACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTG 66082 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||| ||||| || || ||||| Sbjct 66083 CCGGTAAGAGTCTTGACGAAGATCTGCAT 66111 >seq151 Length=514231 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | |||||||||||||| || ||||| || |||| || | |||||||| Sbjct 222687 ACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 222746 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || |||||| | || | | |||||| || || | ||| || ||||| Sbjct 222747 AGCTGCTTGCCCGCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 222806 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||||| || || | ||| || ||| |||| || | || ||||| || Sbjct 222807 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 222866 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || | || ||||| || ||||||||| Sbjct 222867 CCGGTGAGGGTCTTGACGAAGATTTGCATT 222896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414564690567370