Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq372 116 4e-21 seq2 109 5e-19 seq942 95.1 1e-14 seq1391 93.3 4e-14 seq976 91.5 1e-13 seq477 89.7 5e-13 seq151 87.8 2e-12 seq753 86.0 6e-12 seq1090 82.4 7e-11 >seq372 Length=15075 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | |||||| ||||| | || || Sbjct 1628 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAAACCATCACCCTCGAAGTGGAGTCCTCG 1569 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || || ||||| ||||| ||||| || |||||||| || Sbjct 1568 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 1509 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || ||||| || || || |||| | | | | |||||| ||| Sbjct 1508 CAACGATTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCCGACTACAAC 1449 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || |||||| |||| ||||||| | ||||| ||||| Sbjct 1448 ATCCAAAAGGAGTCTACTCTCCACTTGGTCCTCCGCCTTAGGGGAGG 1402 >seq2 Length=914981 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 || ||| ||||||| | || || || || | || ||||| | || ||| ||||| | | Sbjct 66575 CACACACAATGCAAATTTTCGTGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGG 66516 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | ||| ||||||||||||| | ||||| || ||||| ||||| ||||| || |||| Sbjct 66515 AGTCATCCGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTC 66456 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 |||| || ||| | || || | || ||| || |||||||| || | | | | | || Sbjct 66455 CCGACCAGCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCG 66396 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| ||||| || || || || || |||| |||| || Sbjct 66395 ACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTTCT 66356 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | |||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 66052 CGACACCATCGAGAACGTCAAACAAAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCA 65993 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | ||||| | | |||||| || || || || | | | | | | |||||| || Sbjct 65992 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCTTGGCCGACTACAA 65933 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || || || |||||| |||| ||||||| Sbjct 65932 CATCCAGAAGGAGTCTACTCTCCACTTGGTCCT 65900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| |||||||| ||||| || || || || ||||| || Sbjct 65824 CGACACCATCGAGAACGTCAAGCAAAAGATCCAAGACAAGGAGGGTATTCC-CCCGACCA 65766 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || ||||||||| || || || | | | | | | |||||| || Sbjct 65765 GCAACGCCTGATCTTCGCCGGCAAACAGCTGGAGGACGGTCGCACCCTGGCCGACTACAA 65706 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || || || ||||| |||| ||||||| Sbjct 65705 CATCCAGAAGGAGTCTACCCTCCACTTGGTCCT 65673 >seq942 Length=135290 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| ||||||| | || || || || | || ||||| | ||||| ||||| | || | Sbjct 52634 ACACAATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGT 52693 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | |||||||||||| | || ||||| ||||| ||||| ||||| || || || | Sbjct 52694 CTTCGGACACCATCGAGAACGTGAAACAGAAGATCCAGGACAAGGAAGGCATTCCCCCGG 52753 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 | || ||| | | || | || |||||| || || || || | | | | || ||||| Sbjct 52754 ACCAGCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACT 52813 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || || |||||| | || ||||||| Sbjct 52814 ACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCCT 52850 >seq1391 Length=76266 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct 37656 CGACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCA 37597 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | || || | | |||||| || || || || | | | | | |||||| || Sbjct 37596 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCCGACTACAA 37537 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||| || || ||| |||| |||| || | ||||| ||||| Sbjct 37536 CATCCAAAAGGAGTCCACTCTCCACTTGGT-CTCCGCCTTAGGGGAGG 37490 >seq976 Length=280112 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 |||||| ||||||| | || || || || | |||||||| | |||||| | || | | Sbjct 160660 CAAACACAATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTGG 160719 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | ||||||||||||| | || || || |||||| ||||| ||||| || || | Sbjct 160720 AGAGCTCCGACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATTCCCC 160779 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 ||||||| ||| | | || | || |||||| || || || || | | | | | || Sbjct 160780 CCGATCAGCAACGCTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCG 160839 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||| || || || || || |||| | || || | || || ||||| Sbjct 160840 ACTACAACATCCAGAAGGAGTCCACCCTCCACTTAGTTCTTCGTCTGAGGGGAGG 160894 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || || ||||| ||||| ||||| || || || || || Sbjct 141131 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 141190 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | || |||||| || || || || | | | | | | |||||| ||| Sbjct 141191 CAACGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCGACTACAAC 141250 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || || || |||| ||||||| | || || ||||| Sbjct 141251 ATCCAAAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTGAGGGGAGG 141297 >seq477 Length=14742 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| || | || ||| | || | || || Sbjct 6083 ATGCAGATCTTCGTTAAGACCTTGACTGGTAAGACTATTACCTTGGAGGTGGAGTCCTCG 6024 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||||||| ||||| || || || || || || || Sbjct 6023 GACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAG 5964 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | || |||||| || || || || | | | | | | |||||| ||| Sbjct 5963 CAACGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCTTGGCCGACTACAAC 5904 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || || |||| ||||||| | || || ||||| Sbjct 5903 ATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTGAGGGGAGG 5857 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| ||||||||| | |||||||||||||| ||||| ||||| || || |||||||| Sbjct 5796 CGATACCATCGAGAACGTCAAACAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 5737 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||||| || || || || | | | | | | |||||| || Sbjct 5736 GCAGCGCTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGTCGCACCCTGGCCGACTACAA 5677 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||| ||||| || |||| ||||||| Sbjct 5676 CATCCAAAAGGAATCCACCCTCCACTTGGTCCT 5644 >seq151 Length=514231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | || || || ||||| ||||| ||||| || ||||| || || Sbjct 237799 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 237858 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | ||||| | || ||||| || || || || | | | | | |||||| || Sbjct 237859 GCAACGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAA 237918 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||| || || ||| |||| |||||||| Sbjct 237919 CATCCAAAAGGAGTCCACTCTCCACCTGGTCCT 237951 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || ||||| | ||||| | || | || || Sbjct 237968 ATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACCATCACTCTGGAGGTCGAGTCTTCA 238027 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| |||||||| ||||| ||||| || |||||||| || Sbjct 238028 GACACCATCGAGAATGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAG 238087 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | || ||||| || || || || | | | | | |||||| ||| Sbjct 238088 CAACGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACTACAAC 238147 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || || |||| |||| || | || | ||||| Sbjct 238148 ATCCAGAAGGAGTCCACCCTCCACTTGGTGTTGCGTCTCCGCGGAGG 238194 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| || ||||| ||||| ||||| || |||||||| || Sbjct 222836 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 222777 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | | ||||| || || || || | | | | | |||||| || Sbjct 222776 GCAGCGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAA 222717 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||| || |||||| |||| ||||||| | || || ||||| Sbjct 222716 CATCCAAAAGGAGTCTACTCTCCACTTGGTCCTCCGTCTGAGGGGAGG 222669 >seq753 Length=293645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| ||||||| | || || || || | ||||| || | |||||| | || | || | Sbjct 50073 ACACAATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGT 50014 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | |||||||||||| | || || || ||||| ||||| || || || || |||| Sbjct 50013 CTTCGGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCG 49954 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 |||| ||| | | || | || ||||| || || || || | | | | | | ||||| Sbjct 49953 ATCAGCAACGCTTGATCTTCGCGGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCGACT 49894 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || || ||||| |||| ||||||| Sbjct 49893 ACAACATCCAGAAGGAGTCTACCCTCCACTTGGTCCT 49857 >seq1090 Length=245726 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| || ||||| ||||| ||||| || ||||||||||| Sbjct 123567 CGACACCATCGAGAACGTCAAGCAGAAGATCCAAGACAAGGAAGGCATCCCTCCCGATCA 123626 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | || || | | ||||| || || || || | | | | | |||||| || Sbjct 123627 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGACTACAA 123686 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || || || || || |||| ||||||| | ||||| ||||| Sbjct 123687 CATCCAGAAGGAGTCCACCCTCCACTTGGTCCTCCGCCTTAGGGGAGG 123734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478652796835600