Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1059 286 9e-72 >seq1059 Length=95284 Score = 286 bits (316), Expect = 9e-72 Identities = 598/882 (68%), Gaps = 8/882 (1%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || ||||| | || || || ||| | ||||| ||||| || || |||||| || Sbjct 56464 ATCGTTGAGAGGCCTCAACACATGATCATGCGAGTTGCCATCGGCATCCATATGGGAGAC 56523 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCA 363559 ||| ||| || ||||| || || || || | || | | | || || || ||||||| Sbjct 56524 ATTGCTGCTGCCATTGAGACCTACAATCTCAT--GTCCAACCTCTACTTTACTCACGCCA 56581 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 | || || | | ||| || || || || || | ||||| |||||| | || | Sbjct 56582 CCCCCACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTGCTCA 56641 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 |||| ||| || ||||||||| |||| ||||| || ||| | || || | || | Sbjct 56642 CGATGAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTGATCT 56701 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTAC 363738 ||||| || || || || || | | || | |||| | ||||| | |||| ||| Sbjct 56702 CCAAGGCCGCTGGTGGCATCGGCCTCAGCG-TACACACAATCCGTGCCTCGCACAGCTAC 56760 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || || || || || ||||| || || | || |||||||| || ||| || | Sbjct 56761 ATCCGTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAACGAC 56820 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| || ||||||||||| || ||||| || |||||||| || |||||| | || | Sbjct 56821 ACTGCCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTACTTG 56880 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || || || |||| |||||||| ||||| ||| ||| || || ||| Sbjct 56881 GAGCCATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAGAACCACGGCAAGGAG 56940 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || |||| || | || || || || || || |||||| | |||| || |||||||| Sbjct 56941 GAGCTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAGCGA 57000 Query 363979 GTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 |||||| ||| | || | ||||| || ||||| || ||||| ||| || | | || Sbjct 57001 GTGGAGAGCA-ATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCTGA 57059 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| ||||| || || | || || || ||| || ||| |||||| || | Sbjct 57060 TGTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCCAG 57119 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | || || || || |||| ||||| |||||| |||| |||| ||||| || Sbjct 57120 GAGGAGCGTTAAGGCCCAAGAGCTCTGGTTCGCCATCCTGGAGAGCGAGATAGAGACCGG 57179 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || ||||| ||| | ||||| || ||||||||||||||||||||||| ||| |||| || Sbjct 57180 CACGCCCTACATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAACCTCGG 57239 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || |||| |||||||| || || ||||| || || |||||| | ||||| Sbjct 57240 CACCATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAGGACGAAGT 57299 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || || || ||||| || || |||| ||||| |||||| Sbjct 57300 GGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGT 57341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303326797755110