Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq372 95.1 1e-14 seq942 91.5 1e-13 >seq2 Length=914981 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || ||||||||||| ||||||||| ||||| |||||| Sbjct 66568 AATGCAAATTTTCGTGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGGAGTCATC 66509 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | || || || || || || || |||||| |||| || || Sbjct 66508 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 66449 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || || | || || || ||| | || || | | ||| ||||||| || || Sbjct 66448 GCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAA 66389 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || || ||||| || Sbjct 66388 CATCCAGAAGGAGTCCAC 66371 >seq372 Length=15075 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || ||||||||||| ||||| || | || ||||||| Sbjct 2083 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTTGAGGTGGAGTCCTC 2024 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | || || || || || || || |||||| |||| ||| || Sbjct 2023 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1964 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| ||||| || | || || | | ||| ||||||| || || Sbjct 1963 GCAACGTTTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCCGACTACAA 1904 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| || || ||||||||| | || |||| Sbjct 1903 CATCCAGAAGGAGTCTACTCTTCACTTGGT 1874 >seq942 Length=135290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 52638 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGTCTTC 52697 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | || ||||| || || || || |||||| | ||| || || Sbjct 52698 GGACACCATCGAGAACGTGAAACAGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCA 52757 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | || ||||| || | || || | | ||| | ||||| || || Sbjct 52758 GCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAA 52817 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| || || ||||||||| | || |||| Sbjct 52818 CATCCAGAAGGAGTCTACTCTTCACTTGGT 52847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425335679872600