Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1285 114 3e-20 >seq1285 Length=126460 Score = 114 bits (126), Expect = 3e-20 Identities = 342/522 (66%), Gaps = 7/522 (1%) Strand=Plus/Minus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||| |||||||||| | | | || | || | || ||||| | ||||| ||| Sbjct 51478 CTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAAAGAAGGCTGAGTGGGCCATCAAG 51419 Query 243268 TGGCTAGAA--CCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAG 243325 ||| ||||| ||| | | |||||| | || ||||| |||| | || || | Sbjct 51418 TGGATAGAAAACCCCG--ACGGCTTTGCTCACCGGCTCGTGGCCTTTGCCGCTGTGGAGG 51361 Query 243326 GTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGC 243385 | || | || || || || || |||||||||||| || ||| | ||| | |||| Sbjct 51360 GCATCTTTTTCTCTGGTTCCTTTTGTGCCATCTTTTGGTTGAAGAAGAGAGGCCTCATGC 51301 Query 243386 CTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG 243445 |||| || || | ||||||| ||||| | ||||||||| | ||| | || | Sbjct 51300 CTGGACTTTGTTTCAGTAACGAGCAGATCAGCAGGGACGAGGGCATGCACTGCGACTTTG 51241 Query 243446 GTGAGCTTATGTATTCAAAGCTCCAGAACA-AGCTACCATTCGAAACGGTCAAACAA-AT 243503 || | || | | ||||||||| | | ||| ||| | | | ||| || Sbjct 51240 CCTGCCTCCTCTACAACATGATCCAGAACAGACCCTCCAA-CGACTGTGCCCACCAAGAT 51182 Query 243504 CATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCT 243563 || | || || || || | |||||||| || | |||| | ||||| |||| Sbjct 51181 TATTGCTGAGGCTGTGGAGATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGGCT 51122 Query 243564 TATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTT 243623 || ||||||||| | || |||||| | |||||||| || || || || |||||| | | Sbjct 51121 CATCGGCATGAACGCCGAGCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCT 51062 Query 243624 CATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCT 243683 | || || || | ||||| | |||||| | | |||||| |||| || |||||||| Sbjct 51061 GGTGGCCCTCGGCTGCGAGAAGATCTACAACGCTACGAACCCGTTTGACTGGATGGAGCT 51002 Query 243684 CATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||| || | |||| || || ||||| ||||| | ||| || Sbjct 51001 CATCTCCTTGGAAGGCAAGACCAACTTTTTCGAGAGGCGCGT 50960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102857320306750