Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1059 293 2e-74 seq1068 109 5e-19 >seq1059 Length=95284 Score = 293 bits (324), Expect = 2e-74 Identities = 985/1505 (65%), Gaps = 64/1505 (4%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| || || |||||||| || || | ||| || | ||||| || || || Sbjct 56578 GCCACCCCCACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTG 56637 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | |||| | || ||| |||| || || | ||||| ||| ||| | || || Sbjct 56638 CTCACGATGAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTG 56697 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || ||| || || ||||| |||| || ||| | |||||| | | Sbjct 56698 ATCTCCAAGGCCGCTGGTGGCATCGGCCTCAGCGTACACACAATCCGTGCCTCGCACAGC 56757 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||||| || || |||||||| || ||||| ||| |||| ||||| || ||||| ||| Sbjct 56758 TACATCCGTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAAC 56817 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 || | || | ||||| ||||| || || || | | || || |||| || ||||| Sbjct 56818 GACACTGCCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTAC 56877 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | ||||| |||||||||||||| | || | || ||| |||||||||||||| Sbjct 56878 TTGGAGCCATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAGAACCACGGCAAG 56937 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | |||||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct 56938 GAGGAGCTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAG 56997 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || |||| || | ||| || ||||||||||| ||| |||||| || | Sbjct 56998 CGAGTGGAGAGCAATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCT 57057 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 || || || ||| | ||||| | | || |||| |||||| | ||||| ||| Sbjct 57058 GATGTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCC 57117 Query 94432 AGGAAG---GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 |||| | |||| || | || |||| ||| ||| |||| || | ||| Sbjct 57118 AGGAGGAGCGTTAAGG-CCCAAG--AGCTCTGGTTCGCCATCCTGGAGAGCGAGATAGAG 57174 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || || ||||||||||| | | ||||||||| |||| |||||||||||| ||| || Sbjct 57175 ACCGGCACGCCCTACATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAAC 57234 Query 94549 CTCGGGGTGATCAAGAGCTC---GAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 ||||| | || | || || || ||||| ||||| | ||||| || || | Sbjct 57235 CTCGG---CACCATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAG 57291 Query 94606 GACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTG-CGA--GAT 94662 ||||| | |||||||| ||||| | || || || ||| || ||| | | || Sbjct 57292 GACGAAGTGGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGTGTCCATCGAC 57351 Query 94663 GCCTACACGTCTACTGCTTCGTTCGATCTG----GAGGAGCTTGTGAACTTCGCGG---- 94714 || ||| || || | |||| || || | ||| |||| || Sbjct 57352 GCAGACA-GT----GGCCGAGCCCGATTTGACCACAGCCGTTTG-----TTCGAGGTGGT 57401 Query 94715 GAAGGATGGT--CTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771 |||| | || || | ||||| |||| ||| || ||| |||| ||| ||||| | Sbjct 57402 TAAGG-TCGTCACTCGCAACCTCAACAAGGTCATTGACGTCAACTACTATCCCGTTGTCG 57460 Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831 |||| ||||| ||||| ||||| |||||||| || || || || || | |||| Sbjct 57461 AGGCTCGCAACTCGAACCTTCGTCATCGTCCCATCGGAATTGGTGTGCAAGGCCTTGCGG 57520 Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGA 94891 ||| | ||||||||||| | |||| || || || || | | || Sbjct 57521 ACGTCTTTTTGATGATGCGTTTCCCCTGGGAGAGCCAAGAGGCTGCTGACCTCAACCGAG 57580 Query 94892 ACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG- 94950 | || || || | |||||| | || || ||| | |||| | | | ||| | ||| Sbjct 57581 ATATCTTTGAGACCATTTACTTCGCTGCGGTGACAGCATCCAACGAGATTGCC-GCTCGT 57639 Query 94951 GACGGCGGGCCACACGAATCGT-TCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGT 95008 || ||| || || | || | ||| | | | ||| | | | ||| | || |||| Sbjct 57640 GAGGGC---CCCTACCAGTCCTATCCTGGCA--GTCCTGCAAGCAAAGGCCTCTTGCAGT 57694 Query 95009 TCGACCTCTGGGGTGTGAAGCC---CTCGGGTCTGTAC---GACTGGGAAGCTCTACGCG 95062 | ||||||||||| ||| ||| |||| | | || ||||||| | || | Sbjct 57695 TTGACCTCTGGGGAGTGGTGCCTCGTTCGGAGCAGAACTGGGACTGGGCCGGCCT-GAAG 57753 Query 95063 CTGATGTTATCA---AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGG 95119 | || | |||| | ||||| ||| ||| || | ||||| |||||||| || | Sbjct 57754 CAGAAG--ATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTGGCTCCCATGCCTACAG 57811 Query 95120 CCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGT 95179 ||||||| |||||||||| |||||||| |||| || || |||| ||| |||||| | | Sbjct 57812 CCTCCACCTCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCCTACACTTCCAACATCT 57871 Query 95180 ACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC 95239 || | || | | || || || ||| || | |||||| ||| | | | |||| Sbjct 57872 ACTCTCGCCGCATCTTGGCTGGAGACTTCACCATTGTCAACAGCCACTTGATGCAAGACC 57931 Query 95240 TGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGC 95298 ||| | || ||||| | | | || | |||||||||||| | || | ||||||| Sbjct 57932 TGAGAAACTTAGGCCTGTGGAGCGCCGAGCTGAAGAACCAACTGGT-GGCTCACAACGGC 57990 Query 95299 TCCGTCCAGAACAT--CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGT 95356 || || || || | || || || ||||| |||| ||| ||| ||||||||||||| Sbjct 57991 TCTGTTCAACACCTTGCCTGC--ATCCCGGAACACATTAAGAAGCTGTACAAGACCGTGT 58048 Query 95357 GGGAG 95361 ||||| Sbjct 58049 GGGAG 58053 >seq1068 Length=23690 Score = 109 bits (120), Expect = 5e-19 Identities = 187/264 (71%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160 ||||| ||||||| || |||||||| |||||||||| |||||||| |||| || || Sbjct 23166 GTGGCTCCCATGCT-ACAGCCTCCACCTCGCAGATCCTCGGCAACAATGAGTGCTTTGAG 23108 Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220 |||| ||| |||||| | ||| | || | | || || || ||| || | ||||| Sbjct 23107 CCCTACAC-TCCAACATCTACTCTCGCCGCATCTTGGCTGGAGACTTCACCATTGTCAAC 23049 Query 95221 AAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAA 95280 | ||| | | | ||||||| |||| ||||| | | | || | ||||||||| Sbjct 23048 AGCCACTTGATGCAAGACCTGAGAAACTTGGGCCTGTGGAGCGCCGAGCTGAAGAACCAA 22989 Query 95281 CTGCTACGCGC-CAACGGCTCCGTCCAGAACAT--CCCGCAAATACCGGAGGACATCAAG 95337 ||| | || | ||||||||| || || || | || ||| | ||||| |||| ||| Sbjct 22988 CTGGTG-GCTCACAACGGCTCTGTTCAACACCTTGCCTGCA--TCCCGGAACACATTAAG 22932 Query 95338 GCGCTCTACAAGACCGTGTGGGAG 95361 ||| |||||||||||||||||| Sbjct 22931 AAGCTGTACAAGACCGTGTGGGAG 22908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494713274615800