Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq477 93.3 3e-14 seq1129 84.2 2e-11 seq976 84.2 2e-11 seq942 82.4 5e-11 seq151 82.4 5e-11 >seq477 Length=14742 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || ||||| |||||||| ||| || | | |||| || Sbjct 5647 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 5706 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||||||| | ||||| ||||| || ||| ||||| ||||||||||| Sbjct 5707 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 5766 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| || | || || |||||| | || || || || || || || ||| Sbjct 5767 ATCTTTTGTTTGACGTTCTCGATGGTATCGGAGCTCTCCACCTCCAAAGTGATTGTCTTA 5826 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || ||||| || || ||||| Sbjct 5827 CCGGTCAGGGTCTTTACGAAGATCTGCAT 5855 >seq1129 Length=232510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || || || || ||||| || || ||||| |||||||| ||| Sbjct 107007 TGCCACCACGGAGACGCAACACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 106948 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | |||| || | || || |||||| | ||||| ||||| || ||| | Sbjct 106947 CCAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGATCGGGAG 106888 Query 15068 GAATTCCTTCCTTGTC--ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 | || ||||||||||| | |||||| || || | || |||||||| | || Sbjct 106887 GGATACCTTCCTTGTCCTGGATCTTTTGC--TTCACGTTCTCAATAGTATCAGAAGACTC 106830 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || | || |||||||| || |||| ||| || || || || |||||| Sbjct 106829 GACCTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCATA 106778 >seq976 Length=280112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || || || |||||||| ||| || | | |||| || Sbjct 141507 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 141448 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | ||||| ||||| |||||| || || ||||||||||| | Sbjct 141447 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGA 141388 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || || | || ||||||||| | || || || || || || || ||| Sbjct 141387 ATCTTCTGCTTCACGTTCTCGATAGTATCGGAGCTCTCCACCTCCAAAGTGATTGTCTTA 141328 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || ||||| Sbjct 141327 CCAGTCAGGGTCTTGACGAAGATCTGCAT 141299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || || || ||||||||||| |||| | | |||| || Sbjct 161104 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGACCGTCCTCC 161045 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | ||||||||||| |||||| ||||| ||||||||||| Sbjct 161044 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 160985 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || ||||| || | || || || | || ||||| || Sbjct 160984 ATCTTCTGCTTCACATTCTCGATAGTGTCAGAAGACTCGACCTCCAGAGTGATGGTCTTT 160925 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| || || || || || ||||| Sbjct 160924 CCAGTCAAGGTCTTAACGAAGATCTGCAT 160896 >seq942 Length=135290 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || || || || |||||||| |||| | | |||| || Sbjct 53075 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCGAGAGTGCGACCGTCCTCA 53016 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || ||| | ||||||||||| |||||| ||||| ||||||||||| Sbjct 53015 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 52956 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || || | || || || ||| | || || || | |||||| || || Sbjct 52955 ATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTG 52896 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || |||||| Sbjct 52895 CCGGTAAGAGTCTTGACGAAGATCTGCATA 52866 >seq151 Length=514231 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||||||||| | | || || || ||||| || || ||||| ||||||||||| Sbjct 222440 GCCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 222499 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 |||| | | |||| || | || ||||| ||| | || | ||||| |||||| || Sbjct 222500 GAGAGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGG 222559 Query 15069 AATTCCTTCCTTGTC 15083 ||| ||||||||||| Sbjct 222560 AATGCCTTCCTTGTC 222574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385009077425