Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1090 98.7 4e-15 seq1391 89.7 2e-12 seq673 87.8 7e-12 >seq1090 Length=245726 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || ||||| ||||| || ||||| || ||| Sbjct 123736 ATGCAAATCTTCGTCAAGACCTTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCTTCT 123795 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || || || |||||||| ||||||||||| || Sbjct 123796 GACACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 123855 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| | || || || || || || || | || ||||| || ||||| Sbjct 123856 CAACGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCTGACTATAAC 123915 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 123916 ATCCAGAAGGAGTCCACCCTCCACTTGGT 123944 >seq1391 Length=76266 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||||| || ||||| | || || || || Sbjct 37488 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGAGCTCC 37429 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||||| || ||||||||||| || ||||| ||||| || Sbjct 37428 GACACCATCGAGAACGTCAAGCAAAAGATCCAAGATAAGGAGGGCATTCCCCCTGACCAG 37369 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || | || || || || || || || | || ||||| || || || Sbjct 37368 CAACGTTTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACTACAAC 37309 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 37308 ATCCAGAAGGAGTCTACCCTCCACTTGGT 37280 >seq673 Length=153926 Score = 87.8 bits (96), Expect = 7e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 ||||||||||| |||||||||||||| |||||||| || |||||||| | || | ||| Sbjct 103144 ATTCAAGATAAAGAAGGAATTCCTCCGGATCAACAGCGGCTAATTTTCGCTGGCATACAG 103085 Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTA 391256 || |||||||| | || ||| || || || || | | || |||| |||||||| Sbjct 103084 CTCGAAGATGGTCGCACCTTGCTCGACTACAACATCCAGCAAGAGTCAACCCTTCACTTG 103025 Query 391257 GTA 391259 ||| Sbjct 103024 GTA 103022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975677771203340