Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq812 127 2e-23 seq1227 98.7 8e-15 seq720 98.7 8e-15 >seq812 Length=327358 Score = 127 bits (140), Expect = 2e-23 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219 ||| ||| || | ||| |||||||| | ||||||||| |||||||| || ||||| || Sbjct 291370 CTTCGTTCTTGTTAAGGCCATACGCCAGAGCAGCAGCCGTTGGTTCGTTGATAATCCTTT 291429 Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279 ||| | |||||||||||| |||| ||||| ||||||||||| ||||| || || || | Sbjct 291430 CAACCTGAAGACCAGCAATCTTTCCGGCATCCTTAGTGGCTTGCCTTTGCGAGTCATTGA 291489 Query 518280 AATATGCAGGAACAGTAATAACGGC 518304 | || ||||||||||| || || || Sbjct 291490 AGTAGGCAGGAACAGTGATCACAGC 291514 >seq1227 Length=12999 Score = 98.7 bits (108), Expect = 8e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1078767 ATTATTCATCGTGACATTAAGCCATCAAATATTCTCATCGATGAAAATTGGAATGTCAAA 1078826 || || ||||||||| | ||| || || || | | || ||||| ||||| || ||| Sbjct 3111 ATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGGAACGTAAAA 3170 Query 1078827 ATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAACGCCATCATGACTCGTTGTGGT 1078886 || || || ||||| |||||||| ||| |||||| ||||| | ||||| ||||| || Sbjct 3171 ATCGCAGACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGCGGC 3230 Query 1078887 ACTCCTTGTTGGAC 1078900 |||||||||||||| Sbjct 3231 ACTCCTTGTTGGAC 3244 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 1065098 GATCCAATTATTATTCATCGTGACATTAAACCATCCAATATTCTAGTTGATGATAGTATG 1065157 || || ||||| || ||||||||| | || ||||| || | ||||| || | | Sbjct 3102 GAACCTATTATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGG 3161 Query 1065158 AATGTGAAAATTGCTGATTTTGGATTTGCACGTATCAAAGAGGAAAATTCCGTAATGACA 1065217 || || ||||| || || ||||| ||||| |||||| ||| ||||| | ||||||| Sbjct 3162 AACGTAAAAATCGCAGACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACA 3221 Query 1065218 CGTTGTGGAACTCCTTGTTGGAC 1065240 ||||| || |||||||||||||| Sbjct 3222 CGTTGCGGCACTCCTTGTTGGAC 3244 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1088650 CATCGAGACATTAAGCCAGCAAACATTCTTGTTGATGAACATTTCAATGTCAAAATTGCC 1088709 ||||| ||| | ||| | ||| || | ||||| ||| | | || || ||||| || Sbjct 3117 CATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGGAACGTAAAAATCGCA 3176 Query 1088710 GATTTTGGATTTGCTCGTATCAAAGAAGACAATACCACAATGACTCGTTGTGGTACTCCT 1088769 || ||||| |||||||||||| |||||| || | |||||||| ||||| || |||||| Sbjct 3177 GACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGCGGCACTCCT 3236 Query 1088770 TGTTGGAC 1088777 |||||||| Sbjct 3237 TGTTGGAC 3244 >seq720 Length=140915 Score = 98.7 bits (108), Expect = 8e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1078767 ATTATTCATCGTGACATTAAGCCATCAAATATTCTCATCGATGAAAATTGGAATGTCAAA 1078826 || || ||||||||| | ||| || || || | | || ||||| ||||| || ||| Sbjct 102749 ATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGGAACGTAAAA 102690 Query 1078827 ATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAACGCCATCATGACTCGTTGTGGT 1078886 || || || || || |||||||| ||| |||||| ||||| | ||||| |||||||| Sbjct 102689 ATCGCAGACTTCGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGTGGC 102630 Query 1078887 ACTCCTTGTTGGAC 1078900 |||||||||||||| Sbjct 102629 ACTCCTTGTTGGAC 102616 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 1065098 GATCCAATTATTATTCATCGTGACATTAAACCATCCAATATTCTAGTTGATGATAGTATG 1065157 || || ||||| || ||||||||| | || ||||| || | ||||| || | | Sbjct 102758 GAACCTATTATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGG 102699 Query 1065158 AATGTGAAAATTGCTGATTTTGGATTTGCACGTATCAAAGAGGAAAATTCCGTAATGACA 1065217 || || ||||| || || || || ||||| |||||| ||| ||||| | ||||||| Sbjct 102698 AACGTAAAAATCGCAGACTTCGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACA 102639 Query 1065218 CGTTGTGGAACTCCTTGTTGGAC 1065240 |||||||| |||||||||||||| Sbjct 102638 CGTTGTGGCACTCCTTGTTGGAC 102616 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1088650 CATCGAGACATTAAGCCAGCAAACATTCTTGTTGATGAACATTTCAATGTCAAAATTGCC 1088709 ||||| ||| | ||| | ||| || | ||||| ||| | | || || ||||| || Sbjct 102743 CATCGTGACTTGAAGAGCTCCAACCTTTTGGTTGACGAAAACTGGAACGTAAAAATCGCA 102684 Query 1088710 GATTTTGGATTTGCTCGTATCAAAGAAGACAATACCACAATGACTCGTTGTGGTACTCCT 1088769 || || || |||||||||||| |||||| || | |||||||| |||||||| |||||| Sbjct 102683 GACTTCGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGTGGCACTCCT 102624 Query 1088770 TGTTGGAC 1088777 |||||||| Sbjct 102623 TGTTGGAC 102616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780742754613130