Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1059 181 1e-40 seq1285 109 7e-19 seq1057 104 3e-17 seq1068 95.1 2e-14 seq1539 87.8 2e-12 >seq1059 Length=95284 Score = 181 bits (200), Expect = 1e-40 Identities = 635/979 (65%), Gaps = 27/979 (3%) Strand=Plus/Plus Query 111529 GAGACTACGACTTTGGTTATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTC--CAAAG 111586 |||||||| | | ||| ||||| | |||||| | |||| ||||||||| ||| | Sbjct 56393 GAGACTACAATTACTCTTACTTTGGCTTTAAGACCTTGGAGAGGAGCTACCTCTTCAAGG 56452 Query 111587 ACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTAT 111646 |||| || | | || | || || ||||| ||||||| || || ||||| || Sbjct 56453 --TGGAGGGCAAGATCGTTGAGAGGCCTCAACACATGATCATGCGAGTTGCCATCGGCAT 56510 Query 111647 CCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCC--CGTGGTATG 111704 |||| || ||| |||| | ||| | ||||| ||| | |||||| | | || Sbjct 56511 CCATATGGGAGACATTGCTGCTGCCATTGAGACCTACAATCTCATGTCCAACCTC-TACT 56569 Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTC---C 111761 || || |||| || || || ||||||||||| || ||| | || ||| | || | Sbjct 56570 TTACTC-ACGCCACCCCCACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCC 56628 Query 111762 AGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACT 111821 | | ||| || | | | | |||||| ||| | ||||| |||| ||| || | Sbjct 56629 TGCTTTTTGCTCA---CGATGAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAG 56685 Query 111822 GAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGA 111881 |||| ||| ||||| ||| |||||||| ||||| | | | || || | Sbjct 56686 CAATGCGCCTTGATCTCCAAGGCCGCTGGTGGCATCGGCCTCAGCGTACACACAATCCGT 56745 Query 111882 GCCAA-CAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 ||| || || || | || || ||||| || | ||| | || || ||||| Sbjct 56746 GCCTCGCACAGCTAC-ATCCGTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCT 56804 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATC 111997 |||||| ||||||| ||| || | || || |||||| || | ||||| ||| | Sbjct 56805 TCGCGTCTTTAACGACACTGCCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGC 56864 Query 111998 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 112057 | | || ||||| | ||||||||||||||||| | | ||||| || ||| || Sbjct 56865 TTTTGCTGTCTACTTGGAGCCATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAA 56924 Query 112058 CAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| || | |||||| ||| | | || ||||| | ||| |||||| |||| || Sbjct 56925 GAACCACGGCAAGGAGGAGCTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGA 56984 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGC 112177 || ||||||||| |||| ||| | | | ||||| || |||||||| || | || Sbjct 56985 CCTATTCATGAAGCGAGTGGAGAGCAATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGC 57044 Query 112178 ACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGA 112237 ||||| | | |||| | ||| ||||||||||| || |||||||| ||||| | Sbjct 57045 TCCCGGCTTGGCTGATGTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACA 57104 Query 112238 AGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTC 112297 || | || || | || || || || | ||| || || || || Sbjct 57105 GGAGGGCCGAGCCAGGAGGAGCGTTAAGGCCCAAGAGCTCTGGTTCGCCATCCTGGAGAG 57164 Query 112298 TCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAA 112357 | | ||||| || || || || ||||| ||||| ||| | || |||| ||| || Sbjct 57165 CGAGATAGAGACCGGCACGCCCTACATGCTATACAAGGACTCGTGCAACCGCAAGTCCAA 57224 Query 112358 TCAAAAGAATTTGGGTGTGATCAAGAGTTC---CAACCTCTGTACAGAAATCTTGGAATT 112414 ||| |||| | || | || |||| |||||| || || || ||| |||| | Sbjct 57225 CCAACAGAACCTCGG---CACCATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTA 57281 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 || ||| || || ||||||||| |||||||| || ||||||| ||||||| ||| Sbjct 57282 CACCTCCAAGGACGAAGTGGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGT 57341 Query 112475 GGATCCAGAGACAAAGACA 112493 | |||| ||| ||||| Sbjct 57342 G--TCCATCGACGCAGACA 57358 Score = 107 bits (118), Expect = 2e-18 Identities = 319/487 (66%), Gaps = 14/487 (3%) Strand=Plus/Plus Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 ||||||| || || ||| | ||||||||| | || || | ||||| | ||| || Sbjct 57736 GACTGGGCCGGCCTGAAGCAGAAGATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTG 57795 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| |||||||||||| | || ||| | || || ||||| |||||||| ||| Sbjct 57796 GCTCCCATGCCTACAGCCTCCACCTCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCC 57855 Query 112971 TACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 113029 ||||| | |||||||| ||| | | | | | || ||||| || |||||||||| Sbjct 57856 TACACTTCCAACATCTACTCT-CGCCGCATCTTGGCTGGAGACTTCACCATTGTCAACAG 57914 Query 113030 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089 || | || | ||||| | | | | || || ||| | || ||||| | | | Sbjct 57915 CCACTTGATGCAAGACCTGAGAAACTTAGGCCTGTGGAGCGCCGAGCTGAAGAACCAACT 57974 Query 113090 GGTG----AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGA 113145 |||| | | | || || ||||| | ||| || || || | ||||||| Sbjct 57975 GGTGGCTCACAAC----GGCTCTGTTCAACACCTTGCCTGCATCCCGGAACACATTAAGA 58030 Query 113146 AGTTGTACCGCACAGTTTGGGA--AATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203 || ||||| || || ||||| || | | | || || |||||||| || || Sbjct 58031 AGCTGTACAAGACCGTGTGGGAGGTGTCCCAACGTACCTTG--ATCGACATGGCGGCGGA 58088 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGAT 113263 ||| || || || ||||| || || || | || | ||| | || | | Sbjct 58089 TCGAGGGGCGTTTATCGATCAGAGCCAGAGCTTCAACGTGCACATCAAGGCCCCCTCCTT 58148 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 |||||||| | || |||||| | ||| |||||||||||| | |||||||| ||||| Sbjct 58149 TGCCAAGCTCACCTCGATGCACTTTTACGCTTGGAAGAAGGGCTTGAAAACGGGAATGTA 58208 Query 113324 TTACCTC 113330 |||||| Sbjct 58209 CTACCTC 58215 >seq1285 Length=126460 Score = 109 bits (120), Expect = 7e-19 Identities = 178/255 (70%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| | | ||||| | |||||| | || || || | | |||||| || || Sbjct 51490 GAGAAGGACCGCCTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAAAGAAGGCTGAG 51431 Query 102138 TGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTC-CTTTGCTGAGCGACTCTTCGCATT 102196 ||||| || |||||| ||| ||| | || ||||||| | || ||| | || || Sbjct 51430 TGGGCCATCAAGTGG----ATAGAAAACCCCGACGGCTTTGCTCACCGGCTCGTGGCCTT 51375 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 102256 ||| ||| ||||| ||||| |||||||||||||| || || || | |||| | ||||| Sbjct 51374 TGCCGCTGTGGAGGGCATCTTTTTCTCTGGTTCCTTTTGTGCCATCTTTTGGTTGAAGAA 51315 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 | |||| |||||||| || || || ||| ||||||| ||| | |||||||| | Sbjct 51314 GAGAGGCCTCATGCCTGGACTTTGTTTCAGTAACGAGCAGATCAGCAGGGACGAGGGCAT 51255 Query 102317 CCACCAAGAGTTTGC 102331 ||| || ||||| Sbjct 51254 GCACTGCGACTTTGC 51240 >seq1057 Length=235048 Score = 104 bits (114), Expect = 3e-17 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 102088 AGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGA 102147 |||||||| | ||||| | || || || | | | ||||| || || ||||| || Sbjct 120041 AGCTCTTTAACGCCATTGAGACGGTGCCTAGCGTGAAGAAGAAGGCCGAATGGGCGCTGC 119982 Query 102148 AGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 102207 ||| | || |||| | | | |||||| ||| ||| |||| ||||| || | Sbjct 119981 GTTGGATAGA---AAAGCCACAAGCTTTTGCTCTGCGGCTCATCGCCTTTGCCGCAGTGG 119925 Query 102208 AGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCA 102267 | || ||||||||||| |||||||||||||| || | ||||| ||||| |||| || | Sbjct 119924 AAGGCATCTTCTTCTCGGGTTCCTTCTGCGCCATCTTCTGGCTGAAGAAAAGAGGGCTGA 119865 Query 102268 TGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||| || ||| ||||| ||||||||| || Sbjct 119864 TGCCTGGACTCAGCTTCAGCAACGAGCTCAT 119834 >seq1068 Length=23690 Score = 95.1 bits (104), Expect = 2e-14 Identities = 318/487 (65%), Gaps = 16/487 (3%) Strand=Plus/Minus Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 ||||||| || || ||| | ||||||||| | || || | ||||| | ||| || Sbjct 23223 GACTGGGCCGGCCTGAAGCAGAAGATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTG 23164 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || |||| | ||||||||||| | || ||| | || || ||||| |||||||| ||| Sbjct 23163 GCTCCCATGCTA-CAGCCTCCACCTCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCC 23105 Query 112971 TACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 113029 ||||| | |||||||| ||| | | | | | || ||||| || |||||||||| Sbjct 23104 TACAC-TCCAACATCTACTCT-CGCCGCATCTTGGCTGGAGACTTCACCATTGTCAACAG 23047 Query 113030 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089 || | || | ||||| | | | | || || ||| | || ||||| | | | Sbjct 23046 CCACTTGATGCAAGACCTGAGAAACTTGGGCCTGTGGAGCGCCGAGCTGAAGAACCAACT 22987 Query 113090 GGTG----AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGA 113145 |||| | | | || || ||||| | ||| || || || | ||||||| Sbjct 22986 GGTGGCTCACAAC----GGCTCTGTTCAACACCTTGCCTGCATCCCGGAACACATTAAGA 22931 Query 113146 AGTTGTACCGCACAGTTTGGGA--AATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203 || ||||| || || ||||| || | | | || || |||||||| || || Sbjct 22930 AGCTGTACAAGACCGTGTGGGAGGTGTCCCAACGTACCTTG--ATCGACATGGCGGCGGA 22873 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGAT 113263 ||| || || || ||||| || || || | || | ||| | || | | Sbjct 22872 TCGAGGGGCGTTTATCGATCAGAGCCAGAGCTTCAACGTGCACATCAAGGCCCCCTCCTT 22813 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 |||||||| | || |||||| | ||| |||||||||||| | |||||||| ||||| Sbjct 22812 TGCCAAGCTCACCTCGATGCACTTTTACGCTTGGAAGAAGGGATTGAAAACGGGAATGTA 22753 Query 113324 TTACCTC 113330 |||||| Sbjct 22752 CTACCTC 22746 >seq1539 Length=27205 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/255 (68%), Gaps = 7/255 (3%) Strand=Plus/Plus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| | | ||||| | |||||| | || || || | | ||||||||| || Sbjct 26003 GAGAAGGACCGCCTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAAAGAAAGCTGAG 26062 Query 102138 TGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTC-CTTTGCTGAGCGACTCTTCGCATT 102196 ||||| || |||||| ||| ||| | || ||||||| | || ||| | || || Sbjct 26063 TGGGCCATCAAGTGG----ATAGAAAACCCCGACGGCTTTGCTCACCGGCTCGTGGCCTT 26118 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 102256 || ||| | || ||||| |||||||||||||| || || || | |||| | ||||| Sbjct 26119 CGCTGCTGTGG--GGCATCTTTTTCTCTGGTTCCTTTTGTGCCATCTTTTGGTTGAAGAA 26176 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 | |||| || ||||| || || || ||| || |||| ||| | |||||||| | Sbjct 26177 GAGAGGCCTTATGCCTGGACTTTGTTTCAGTAATGAGCAGATCAGCAGGGACGAGGGCAT 26236 Query 102317 CCACCAAGAGTTTGC 102331 ||| || ||||| Sbjct 26237 GCACTGTGACTTTGC 26251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620729946355600