Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1059 188 8e-43 >seq1059 Length=95284 Score = 188 bits (208), Expect = 8e-43 Identities = 616/944 (65%), Gaps = 25/944 (3%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||| |||| ||||| |||| || || | ||||| |||||| || ||||| ||| Sbjct 57341 ACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTTGGAGGTG 57282 Query 106508 TACTCTAAAATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 ||||| | || || || || | |||| |||| ||| || || | |||| |||| Sbjct 57281 TACTCCATGATCTCCGTGCAAAGGTTGCTTGAACG---AATGGTGCCGAGGTTCTGTTGG 57225 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| |||||||| |||||||| |||||||||||||| || ||||| ||| Sbjct 57224 TTGGACTTGCGGTTGCACGAGTCCTTGTATAGCATGTAGGGCGTGCCGGTCTCTATCTCG 57165 Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCC 106684 || || || || ||| | || ||| || | |||| || |||||| Sbjct 57164 CTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAACGCTCCTCCTGGCTCGGCCCTCC 57105 Query 106685 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744 ||||| |||||||| || ||||||||||| ||| | || | | || || Sbjct 57104 TGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGA 57045 Query 106745 GCCTTGTCTGGACAGAAAAGAGACCATT---GACCACCCTCCTCAACCCGCTTCATGAAA 106801 || | || ||||| || || ||||| | || | |||| || ||||||||||| Sbjct 57044 GCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCC---ACTCGCTTCATGAAT 56988 Query 106802 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 106861 ||||| |||| ||| || | ||||||| ||||| || ||| || | || ||| Sbjct 56987 AGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTGG 56928 Query 106862 TTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 || || | | ||| || ||||| | | ||||||||||||||||| | ||||| || Sbjct 56927 TT-CTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGC 56869 Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | || ||| || || | || |||| | || || | || ||| ||||||| || Sbjct 56868 AAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGAC 56809 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTAT 107036 ||||||||| || || | ||| | || ||||| || || || || || | | Sbjct 56808 GCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGAT-GTAGCTGTGCG 56750 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 ||| | | || | | | || || || ||||| ||| ||||| || | Sbjct 56749 AGGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGC 56690 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 | | | | || || | ||||| || | ||| ||||||| | | | || | |||| Sbjct 56689 ATTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGC 56630 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | || | ||||| | ||| || || |||||||| || || || |||||| | | Sbjct 56629 AGGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGAGTGGGGGTGGCGTGAGTAA 56570 Query 107217 A-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | | | || |||||| | ||| ||||| | | ||| | |||||||| || ||| Sbjct 56569 AGTAGAGGTT-GGACATGAGATTGTAGGTCTCAATGGCAGCAGCAATGTCTCCCATATGG 56511 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335 ||||||||||| || ||||| | ||||| ||| || | || | || |||| || | Sbjct 56510 ATGCCGATGGCAACTCGCATGATCATGTGTTGAGGCCTCTCAACGATCTTGCCCTCCA-- 56453 Query 107336 CGTTGAAGA--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 107377 | ||||||| |||||| |||| | ||| || | ||||||||| Sbjct 56452 CCTTGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAGCCAAAGTAA 56409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 105894 TGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAG 105952 |||||||||| || ||||| || | | | | | ||| |||||||| | |||||| Sbjct 57913 TGTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCG-AGAGTAGATGTTGGAAGTGTAG 57855 Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 || |||||||| ||||| || || | ||| || | |||||||||||| ||||| || ||| Sbjct 57854 GGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGCATGGGAGCC 57795 Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGAT 106047 | ||| | ||||| | || || | |||||||| Sbjct 57794 ACCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGAT 57760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589968963510200