Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1059 84.2 2e-11 >seq1059 Length=95284 Score = 84.2 bits (92), Expect = 2e-11 Identities = 223/341 (65%), Gaps = 0/341 (0%) Strand=Plus/Minus Query 48099 TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCA 48158 || ||||||||| ||| || | | |||||| || || || | |||| | | || || Sbjct 57107 TCCTGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCG 57048 Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218 ||| ||| || ||||| | || ||||| |||| || | | |||| |||| ||| Sbjct 57047 GGAGCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCCACTCGCTTCATGAAT 56988 Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278 | || || | ||| || || ||| | || || | | || || || ||||| Sbjct 56987 AGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTGG 56928 Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338 ||| | || || || ||||| || | | || || |||||||| || || || | || Sbjct 56927 TTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGCA 56868 Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398 | | ||| ||||| |||||||| || | ||||||||||| | |||| | || Sbjct 56867 AAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGACG 56808 Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCC 48439 | | ||| |||| | ||| || || | ||||| ||||| Sbjct 56807 CGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCC 56767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562097522692200