Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1059 165 1e-35 >seq1059 Length=95284 Score = 165 bits (182), Expect = 1e-35 Identities = 611/944 (65%), Gaps = 25/944 (3%) Strand=Plus/Plus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAACGGCTCGATGGCATCCTC 75202 ||||||||| | || ||| | |||| |||||| ||||||| | | || |||| || Sbjct 56409 TTACTTTGGCTTTAAGACCTTGGAGAGGAGCTACCTCTTCAAGG--TGGAGGGCAAGATC 56466 Query 75203 ATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATT 75262 | || | || || ||||| ||||||| || || ||||||||||| || ||||||| Sbjct 56467 GTTGAGAGGCCTCAACACATGATCATGCGAGTTGCCATCGGCATCCATATGGGAGACATT 56526 Query 75263 GATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACC 75321 | | ||| | | ||||| ||| | |||||| || | | || | |||||| || || Sbjct 56527 GCTGCTGCCATTGAGACCTACAATCTCATGTCC-AACCTCTACTTTACTCACGCCACCCC 56585 Query 75322 AACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381 || |||||||| || || ||| | ||||| | || ||||| | || | | Sbjct 56586 CACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTGCTCACGAT 56645 Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 | ||||||| ||| | || ||||| | || || | | | || || ||||| || Sbjct 56646 GAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTGATCTCCAA 56705 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTC 75500 | ||||| || || || | | | || | | ||| | | || || | Sbjct 56706 GGCCGCTGGTGGCATCGGCCTCAGCGTACACACAATCCGTGCCTCGCACAGCTAC-ATCC 56764 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 | || || ||||| || | ||| | || || ||||||||||| ||||||| ||| | Sbjct 56765 GTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAACGACACTG 56824 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 | | || || | |||| || | ||||| || | | || ||||||||||| | Sbjct 56825 CCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTACTTGGAGC 56884 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAG 75676 ||||||| || || | | ||||| || ||| | | || ||||| || | || ||| Sbjct 56885 CATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAG-AACCACGGCAAGGAGGAG 56943 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || ||||| ||||||| | || ||| |||| ||||| ||||||||||| || Sbjct 56944 CTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAGCGAGT- 57002 Query 75737 GAGGAGGGTGGTC---AATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 |||| | || | ||||| || || ||||| || | || || || | | || Sbjct 57003 --GGAGAGCAATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCTGAT 57060 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 | ||| ||||||||||| || |||||||| || ||| ||||||| |||||| Sbjct 57061 GTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCCAGG 57120 Query 75854 GCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 || || ||| || | ||| || || || | ||| ||||| || Sbjct 57121 AGGAGCGTTAAGGCCCAAGAGCTCTGGTTCGCCATCCTGGAGAGCGAGATAGAGACCGGC 57180 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || || || ||||| |||||||| | || ||| ||| |||||| |||| | || Sbjct 57181 ACGCCCTACATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAACCTCGGC 57240 Query 75974 ACAATCAAGAGCTCA---AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || | ||| || ||||||||||| || | |||||||| ||||| || Sbjct 57241 AC---CATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAGGACGAA 57297 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 |||||| ||||| | || || |||| ||||| |||| ||| Sbjct 57298 GTGGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGT 57341 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 76475 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 76534 ||||||||| | || || | ||||| | ||| |||| || ||||| |||||||||||| Sbjct 57760 ATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTGGCTCCCATGCCTACAGCCTCCACC 57819 Query 76535 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGA 76594 | || ||| | || || ||||| |||||||| || ||||| | ||||||||| | Sbjct 57820 TCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCCTACACTTCCAACATCTACTCTCGC 57879 Query 76595 AGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 | | | | || || || || ||||||||||| Sbjct 57880 CGCATCTTGGCTGGAGACTTCACCATTGTCAACA 57913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557631322400