Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq775 100 8e-16 seq933 86.0 2e-11 >seq775 Length=175659 Score = 100 bits (110), Expect = 8e-16 Identities = 189/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || || ||||| ||| || || || ||||||||||| || | ||| | ||||||||| Sbjct 86699 TGGATGTAACCCGTTTCGGAAGTCTTCACAGCTGTATCGATCAAACCCTCGCGACCACCC 86640 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | ||||| ||| || || | | | ||| | || || || Sbjct 86639 ATAGCATGGAAGAAGAACTCTTGCGGAGTAAGTCCTCTCAGGTAAGAGTTTTCCACAAAG 86580 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| |||||| || ||| |||| ||||| |||| |||||| | || Sbjct 86579 CCACGACTCTCGGGGCCATAGTCATCCTTGACGAAGTGAGGCAATGTCCTGGCTTTGAAG 86520 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 | | |||||||| || || |||||||||||||| | || | ||| ||||| | | Sbjct 86519 TTGAAGGGGATACGGCGACCTTCTACGTTCTGCTGTCCTACACAAGCAATGATCTGTGCA 86460 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 || || | || ||||| ||||| ||||||| Sbjct 86459 ATGTTGATGGAGGAACCTTTGGAACCAGCCGTTACCAT 86422 >seq933 Length=369102 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/157 (73%), Gaps = 6/157 (4%) Strand=Plus/Minus Query 251834 TCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTT 251893 |||| ||| |||| ||||||||||||||||| ||||| || |||| |||||||||||| Sbjct 200921 TCAGCTGGCCGATGGTCATACGACTGGGAATGGCATGTGGGTTGACGATGATGTCGGGAG 200862 Query 251894 TCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTC 251950 | | || || | || | ||||| ||| |||| | || | | || || || | Sbjct 200861 TGATGCCCTCGACCGTCCAAGGCATGTCC---TCCTGACGGTAGGTCATACCGATGGTAC 200805 Query 251951 CCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| ||||||||| |||||||| || || || Sbjct 200804 CCTTTTGGCCGTGACGACTGCTGAACTTGTCTCCGAT 200768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471787333450885