Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq372 111 1e-19 seq1090 98.7 8e-16 seq942 91.5 1e-13 seq1391 89.7 4e-13 seq1129 89.7 4e-13 seq2 89.7 4e-13 seq753 86.0 5e-12 seq151 86.0 5e-12 >seq372 Length=15075 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| |||||||||||||| ||| ||||| |||| | Sbjct 1628 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAAACCATCACCCTCGAAGTGGAGTCCTCG 1569 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||||| ||||| |||||| | || || || Sbjct 1568 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 1509 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| || | || | || || || ||||||||||||| | | || |||| || |||||| Sbjct 1508 CAACGATTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCCGACTACAAC 1449 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || ||||| || ||||| | ||| |||| Sbjct 1448 ATCCAAAAGGAGTCTACTCTCCACTTGGT 1420 >seq1090 Length=245726 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||| | |||||||| ||||||||| | ||| |||| | Sbjct 123508 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAGACCATTACCTTGGAAGTGGAGAGCTCC 123567 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||||| ||||| |||||| | || ||||| Sbjct 123568 GACACCATCGAGAACGTCAAGCAGAAGATCCAAGACAAGGAAGGCATCCCTCCCGATCAG 123627 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | |||||| || ||||||||||| | | | || |||| || |||||| Sbjct 123628 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGACTACAAC 123687 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || || || || || || | ||| |||| Sbjct 123688 ATCCAGAAGGAGTCCACCCTCCACTTGGT 123716 >seq942 Length=135290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || || || ||||| || ||||| |||| || Sbjct 52638 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGTCTTC 52697 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || ||||||||||| ||||| |||||| | ||| ||| || Sbjct 52698 GGACACCATCGAGAACGTGAAACAGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCA 52757 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | || || || ||||||||||| | | | || | || || ||||| Sbjct 52758 GCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAA 52817 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| || || || ||||| | ||| |||| Sbjct 52818 CATCCAGAAGGAGTCTACTCTTCACTTGGT 52847 >seq1391 Length=76266 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||| | |||||||| || |||||| | ||| |||| | Sbjct 37715 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTGGAAGTGGAGAGCTCC 37656 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || || ||||| ||||| |||||| | || ||||| Sbjct 37655 GACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 37596 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || || ||||||||||| | | | || |||| || |||||| Sbjct 37595 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCCGACTACAAC 37536 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || ||||| || || || | ||| |||| Sbjct 37535 ATCCAAAAGGAGTCCACTCTCCACTTGGT 37507 >seq1129 Length=232510 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| |||||||||||||| || | || ||| || Sbjct 106779 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAAACCATCACTCTTGAGGTCGAGTCTTCT 106838 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || || ||||| ||||| ||||| | || ||||| Sbjct 106839 GATACTATTGAGAACGTGAAGCAAAAGATCCAGGACAAGGAAGGTATCCCTCCCGATCAG 106898 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | || | || ||||| ||||||||||| | | | || |||| || |||||| Sbjct 106899 CAGCGCTTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAAC 106958 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || ||||| || || || | ||| ||||||| Sbjct 106959 ATCCAAAAGGAGTCCACCCTCCACTTGGTGTT 106990 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || ||||| ||||| ||| | || |||| || Sbjct 106550 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 106609 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||||| ||||| |||||| | ||| || || Sbjct 106610 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 106669 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | || || || ||||||||||| | | | || | || |||||||| Sbjct 106670 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACTCTCGCTGATTACAA 106729 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || || || || | ||| |||| Sbjct 106730 TATTCAGAAGGAGTCCACCCTCCACTTGGT 106759 >seq2 Length=914981 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||| | |||||||| || |||||| | ||| |||| | Sbjct 66111 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTGGAAGTGGAGAGCTCC 66052 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || ||||| ||||| ||||| |||||| | || ||||| Sbjct 66051 GACACCATCGAGAACGTCAAACAAAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 65992 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || || ||||||||||| | | || |||| || |||||| Sbjct 65991 CAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCTTGGCCGACTACAAC 65932 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || || || || ||||| | ||| |||| Sbjct 65931 ATCCAGAAGGAGTCTACTCTCCACTTGGT 65903 >seq753 Length=293645 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || ||||| ||||| ||| | || |||| || Sbjct 50069 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 50010 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||||| ||||| || ||| | ||| ||||| Sbjct 50009 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 49950 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | ||||| || ||||||||||| | | || |||| || ||||| Sbjct 49949 GCAACGCTTGATCTTCGCGGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCGACTACAA 49890 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| || || || ||||| | ||| |||| Sbjct 49889 CATCCAGAAGGAGTCTACCCTCCACTTGGT 49860 >seq151 Length=514231 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | |||||||| ||||| || | || |||| Sbjct 222896 AATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTC 222837 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | || || |||||||| ||||| |||||| | || || || Sbjct 222836 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 222777 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | || | |||||| || ||||||||||| | | | || |||| || ||||| Sbjct 222776 GCAGCGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAA 222717 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| ||||| || ||||| | ||| |||| Sbjct 222716 CATCCAAAAGGAGTCTACTCTCCACTTGGT 222687 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | |||||||| ||||| || | || |||| Sbjct 237739 AATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTC 237798 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | || || |||||||| ||||| |||||| | || || || Sbjct 237799 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 237858 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || || | ||||| || ||||||||||| | | | || |||| || ||||| Sbjct 237859 GCAACGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAA 237918 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| ||||| || || || | ||| |||| Sbjct 237919 CATCCAAAAGGAGTCCACTCTCCACCTGGT 237948 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329 ||||| || || ||||| || ||||| ||||| || |||||| | || |||| || Sbjct 238196 ATGCAGATCTTCGTCAAGACCTTAACTGGCAAGACTATTACCTTGGAGGTGGAGAGCTCT 238255 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || ||| | || || || ||||| ||||| |||||| | ||| || Sbjct 238256 GAC---ACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGAC 238312 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | ||||| || ||||||||||||| | | || | || |||||| Sbjct 238313 CAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTCGCTGATTAC 238372 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || | ||| |||| | | ||||||| || Sbjct 238373 AACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGCGAGGTGG 238422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833524431265