Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq812 127 2e-23 seq1227 98.7 7e-15 seq720 98.7 7e-15 >seq812 Length=327358 Score = 127 bits (140), Expect = 2e-23 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 ||| ||| || | ||| |||||||| | ||||||||| |||||||| || ||||| || Sbjct 291370 CTTCGTTCTTGTTAAGGCCATACGCCAGAGCAGCAGCCGTTGGTTCGTTGATAATCCTTT 291429 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 ||| | |||||||||||| |||| ||||| ||||||||||| ||||| || || || | Sbjct 291430 CAACCTGAAGACCAGCAATCTTTCCGGCATCCTTAGTGGCTTGCCTTTGCGAGTCATTGA 291489 Query 282447 AATATGCAGGAACAGTAATAACGGC 282471 | || ||||||||||| || || || Sbjct 291490 AGTAGGCAGGAACAGTGATCACAGC 291514 >seq1227 Length=12999 Score = 98.7 bits (108), Expect = 7e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 |||||||||||||| || ||||| ||||| | ||||| |||||| ||| |||||||| Sbjct 3244 GTCCAACAAGGAGTGCCGCAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 3185 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 ||||| || || ||||| || ||||| ||||| || | | || || || ||| | | Sbjct 3184 CCAAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 3125 Query 1048089 TCACGATGAATAAT 1048102 |||||||| || || Sbjct 3124 TCACGATGGATGAT 3111 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 1061614 GTCCAACAAGGAGTTCCACAACGTGTCATTACGGAATTTTCCTCTTTGATACGTGCAAAT 1061673 |||||||||||||| || |||||||||||| | ||||| ||| |||||| ||||| Sbjct 3244 GTCCAACAAGGAGTGCCGCAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 3185 Query 1061674 CCAAAATCAGCAATTTTCACATTCATACTATCATCAACTAGAATATTGGATGGTTTAATG 1061733 ||||| || || ||||| || ||| | || ||||| | || ||||| || | | Sbjct 3184 CCAAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 3125 Query 1061734 TCACGATGAATAATAATTGGATC 1061756 |||||||| || ||||| || || Sbjct 3124 TCACGATGGATGATAATAGGTTC 3102 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1038122 GTCCAACAAGGAGTACCACAACGAGTCATTGTGGTATTGTCTTCTTTGATACGAGCAAAT 1038181 |||||||||||||| || ||||| |||||||| | || |||||| |||||||||||| Sbjct 3244 GTCCAACAAGGAGTGCCGCAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 3185 Query 1038182 CCAAAATCGGCAATTTTGACATTGAAATGTTCATCAACAAGAATGTTTGCTGGCTTAATG 1038241 ||||| || || ||||| || || | | ||| ||||| | || ||| | ||| | | Sbjct 3184 CCAAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 3125 Query 1038242 TCTCGATG 1038249 || ||||| Sbjct 3124 TCACGATG 3117 >seq720 Length=140915 Score = 98.7 bits (108), Expect = 7e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1047969 GTCCAACAAGGAGTACCACAACGAGTCATGATGGCGTTCTCTTCTTTGATGCGAGCAAAT 1048028 |||||||||||||| |||||||| ||||| | ||||| |||||| ||| |||||||| Sbjct 102616 GTCCAACAAGGAGTGCCACAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 102675 Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 || || || || ||||| || ||||| ||||| || | | || || || ||| | | Sbjct 102676 CCGAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 102735 Query 1048089 TCACGATGAATAAT 1048102 |||||||| || || Sbjct 102736 TCACGATGGATGAT 102749 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 1061614 GTCCAACAAGGAGTTCCACAACGTGTCATTACGGAATTTTCCTCTTTGATACGTGCAAAT 1061673 |||||||||||||| ||||||||||||||| | ||||| ||| |||||| ||||| Sbjct 102616 GTCCAACAAGGAGTGCCACAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 102675 Query 1061674 CCAAAATCAGCAATTTTCACATTCATACTATCATCAACTAGAATATTGGATGGTTTAATG 1061733 || || || || ||||| || ||| | || ||||| | || ||||| || | | Sbjct 102676 CCGAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 102735 Query 1061734 TCACGATGAATAATAATTGGATC 1061756 |||||||| || ||||| || || Sbjct 102736 TCACGATGGATGATAATAGGTTC 102758 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1038122 GTCCAACAAGGAGTACCACAACGAGTCATTGTGGTATTGTCTTCTTTGATACGAGCAAAT 1038181 |||||||||||||| |||||||| |||||||| | || |||||| |||||||||||| Sbjct 102616 GTCCAACAAGGAGTGCCACAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 102675 Query 1038182 CCAAAATCGGCAATTTTGACATTGAAATGTTCATCAACAAGAATGTTTGCTGGCTTAATG 1038241 || || || || ||||| || || | | ||| ||||| | || ||| | ||| | | Sbjct 102676 CCGAAGTCTGCGATTTTTACGTTCCAGTTTTCGTCAACCAAAAGGTTGGAGCTCTTCAAG 102735 Query 1038242 TCTCGATG 1038249 || ||||| Sbjct 102736 TCACGATG 102743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740551601282730