Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq753 125 7e-24 seq1129 113 4e-20 seq151 105 7e-18 seq372 102 8e-17 seq477 100 3e-16 seq1391 96.9 3e-15 seq2 91.5 1e-13 seq1090 87.8 2e-12 seq976 87.8 2e-12 >seq753 Length=293645 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| | | |||||| || || || | || || || || || |||||||| ||| Sbjct 49613 GCCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 49672 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| || || || || |||||| ||||||| || |||||||||||||| Sbjct 49673 CAAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGG 49732 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || ||||| || | | ||| | ||||| | || ||| || Sbjct 49733 GATGCCTTCCTTGTCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCAC 49792 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||| | || | ||||||||||| | || || ||||| || |||||| Sbjct 49793 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 49841 >seq1129 Length=232510 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || | |||||| || || || | || || || ||||| |||||||| ||| Sbjct 107006 GCCACCACGGAGACGCAACACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGC 106947 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| || || || |||||||| |||||| || |||||||||||||| Sbjct 106946 CAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGATCGGGAGG 106887 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || ||||| ||||| || ||||| || | | || | || || | | || || Sbjct 106886 GATACCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGAC 106827 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 |||| ||| | || ||||||||||| || || ||||| || |||||| || Sbjct 106826 CTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCATACCT 106775 >seq151 Length=514231 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| | | ||| | || || || | ||||| || ||||| |||||||| ||| Sbjct 222668 GCCTCCCCTCAGACGGAGGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGC 222727 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| || || || || || ||| |||||| ||| ||||| |||||||| Sbjct 222728 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGCTGCTGGTCGGGAGG 222787 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || || || || | | || | ||||| | | || || Sbjct 222788 GATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCAC 222847 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| ||| | ||||||||||| | || || ||||| |||||||| Sbjct 222848 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 222895 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| ||||| ||||| | || || || | || || || ||||| ||||||||||| Sbjct 222440 GCCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 222499 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| ||| || || || || || || |||| || || ||||| ||||| || Sbjct 222500 GAGAGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGG 222559 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || ||||| || | | || | ||||| | | || || Sbjct 222560 AATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCAATGGTGTCCGACGACTCGAC 222619 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| ||| | ||||| || ||||| || || ||||| || ||||| Sbjct 222620 CTCAAGAGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATCTGCAT 222667 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| ||| || |||| ||| || || || || || Sbjct 237936 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCC 237877 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| || |||||||| || ||||| |||||||| ||||| || || || || Sbjct 237876 GCGAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 237817 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || || |||| ||| | ||||||||||| | || Sbjct 237816 ACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 237757 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 237756 TTGACGAAGATTTGCAT 237740 >seq372 Length=15075 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| || ||||| |||||||| ||| || |||| || || || || || ||| Sbjct 1432 GTAGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCA 1491 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||||| |||||||| |||||||| |||||||| ||||| || || || || Sbjct 1492 GCGAAGATCAATCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 1551 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || || ||||| | || | || ||||||||||| || Sbjct 1552 ACGTTCTCGATGGTGTCCGAGGACTCCACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTC 1611 Query 137395 TTTACGAATATTTGCATAGCT 137415 || ||||| || |||||| || Sbjct 1612 TTGACGAAGATCTGCATACCT 1632 >seq477 Length=14742 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || || | ||| | || || || | || ||||| ||||| |||||||| ||| Sbjct 5626 TGTCCGCCACGCAGACGAAGGACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCG 5685 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 || |||| ||| || || || || ||||| |||||| || ||||||||||| Sbjct 5686 GCCAGGGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGG 5745 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| ||||| || |||||||| | | || | || || | | || Sbjct 5746 GGAATGCCTTCCTTGTCCTGGATCTTTTGTTTGACGTTCTCGATGGTATCGGAGCTCTCC 5805 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || | ||| | ||||| ||||||| || |||||||| || ||||| Sbjct 5806 ACCTCCAAAGTGATTGTCTTACCGGTCAGGGTCTTTACGAAGATCTGCAT 5855 >seq1391 Length=76266 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| ||| || || | ||| || || || || || Sbjct 37519 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCCAGCTGCTTGCCG 37578 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| || |||||||||||||| |||||||| ||||| || ||||| || Sbjct 37579 GCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTG 37638 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||| | || | ||||||||||| | || Sbjct 37639 ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTGCCGGTAAGAGTC 37698 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 37699 TTGACGAAGATCTGCATA 37716 >seq2 Length=914981 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| || || || |||||||| ||| || || | ||| || || || || || Sbjct 65915 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCGTCCTCCAGCTGCTTGCCG 65974 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||| || || |||||||| ||||| |||||||| ||||| || |||||||| Sbjct 65975 GCAAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGTTTG 66034 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||| | || | ||||||||||| | || Sbjct 66035 ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTGCCGGTAAGAGTC 66094 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 66095 TTGACGAAGATCTGCATA 66112 >seq1090 Length=245726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || |||||||| ||| || || | ||| || || || || || Sbjct 123704 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCC 123645 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| || |||||||||||||| |||||||| ||||| || || || || Sbjct 123644 GCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTCTGCTTG 123585 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||| | || | ||||||||||| | || Sbjct 123584 ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAAGGTAATGGTCTTGCCGGTAAGAGTC 123525 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 123524 TTGACGAAAATCTGCATA 123507 >seq976 Length=280112 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| | | ||| | |||||| || | || || || || || |||||||| ||| Sbjct 160895 GCCTCCCCTCAGACGAAGAACTAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 160836 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| || || || || || || |||||| |||||||||||||| || Sbjct 160835 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGGGG 160776 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| ||| || || || | | || | ||||| | | || || Sbjct 160775 AATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCAC 160716 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || || | || || ||||| |||||||| Sbjct 160715 CTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 160668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488534198586000