Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1129 113 3e-20 seq976 111 1e-19 seq151 111 1e-19 seq753 109 4e-19 seq2 109 4e-19 seq917 100 2e-16 seq942 96.9 2e-15 seq1391 95.1 8e-15 seq372 95.1 8e-15 seq1090 93.3 3e-14 seq477 93.3 3e-14 >seq1129 Length=232510 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| |||||||| || || ||| ||| ||||| |||||||| |||| Sbjct 107005 CCACCACGGAGACGCAACACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCC 106946 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || || || ||||| ||||||||||| | || Sbjct 106945 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGATCGGGAGGG 106886 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| || || || ||| || | || | || || || || || Sbjct 106885 ATACCTTCCTTGTCCTGGATCTTTTGCTTC-ACGTTCTCAATAGTATCAGAAGACTCGAC 106827 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| ||||| || || || || || || |||||||||||| Sbjct 106826 CTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCATA 106778 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||| || || ||| ||| || || || |||||||| | | Sbjct 107233 CCACCGCGGAGACGAAGGACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 107174 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || ||||| || ||||| |||||||| || | || Sbjct 107173 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGA 107114 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| |||||||| |||| | | || | ||||||| ||||| Sbjct 107113 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCA-CGTTCTCGATGGTGTCGGAGCTCTCCAC 107055 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 107054 CTCCAAAGTGATTGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 107007 >seq976 Length=280112 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | ||||| || || ||| ||| || || ||||||||||| | | Sbjct 161122 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 161063 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || ||||| || |||||||||||||| || | || Sbjct 161062 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGA 161003 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||||| ||| |||| || | ||||| || || || Sbjct 161002 ATGCCTTCCTTGTCCTGGATCTTCTGCTTC-ACATTCTCGATAGTGTCAGAAGACTCGAC 160944 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || || ||||||||||| Sbjct 160943 CTCCAGAGTGATGGTCTTTCCAGTCAAGGTCTTAACGAAGATCTGCAT 160896 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || || ||| ||| || || |||||||| |||| || ||||| | Sbjct 161339 ACGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 161280 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| |||| || || ||||| || ||||| |||||||| || | || | ||| || || Sbjct 161279 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTT 161220 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| ||||| || | ||| ||| |||||| |||||||| || | |||| Sbjct 161219 GTCCTGAATCTTCTGCTTGA-CATTTTCAATGGTGTCAGAGGATTCCACCTCCAGGGTGA 161161 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || || || ||||||||||| Sbjct 161160 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 161124 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || ||| ||| || || |||||||| |||| Sbjct 141526 ACCACCGCGGAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 141467 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||| || || ||||| || ||||| |||||||| || | || Sbjct 141466 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGG 141407 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| ||||| |||| | | || | || ||| |||| Sbjct 141406 GATGCCTTCCTTGTCCTGAATCTTCTGCTTCA-CGTTCTCGATAGTATCGGAGCTCTCCA 141348 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| || | || || || ||||||||||| Sbjct 141347 CCTCCAAAGTGATTGTCTTACCAGTCAGGGTCTTGACGAAGATCTGCAT 141299 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| ||| || || |||||||| |||| | ||||| |||| ||| Sbjct 141735 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCC 141676 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || ||||| |||||||| || | || | || || ||||| Sbjct 141675 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGG 141616 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || ||||| | | | || | ||||||| ||||| || | ||||| ||||| Sbjct 141615 ATCTTTTGTTTGA-CGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTTTT 141557 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || ||||| || || |||||||||||| Sbjct 141556 GCCAGTCAACGTCTTGACGAAGATCTGCATA 141526 >seq151 Length=514231 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | ||||| || || ||| ||| ||||| ||||||||||| | | Sbjct 222441 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCG 222500 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || || || || | |||||||| || | || Sbjct 222501 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 222560 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || ||| || | || | |||||| || || || Sbjct 222561 ATGCCTTCCTTGTCCTGGATCTTTTGCTTC-ACGTTCTCAATGGTGTCCGACGACTCGAC 222619 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || ||||| || || ||||||||||| Sbjct 222620 CTCAAGAGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATCTGCAT 222667 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||||| || ||||| ||| ||||| |||||||| |||| Sbjct 222669 CCTCCCCTCAGACGGAGGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCC 222728 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| |||||||||||||| || | || Sbjct 222729 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGCTGCTGGTCGGGAGGG 222788 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||||| || || | || | ||||||| ||||| Sbjct 222789 ATGCCTTCCTTGTCCTGGATCTTCTGCTT-GACGTTCTCGATGGTGTCGGAGCTCTCCAC 222847 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 |||| ||||| || || || || | || || || ||||| ||||| || Sbjct 222848 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATTGT 222898 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | ||||| || || ||| ||| || || ||||||||||| | | Sbjct 238422 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 238363 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || || | |||||||| || | || Sbjct 238362 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 238303 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | ||||| ||||| || || || || || | || | |||||| ||| || Sbjct 238302 ATGCCTTCCTTGTCCTGGATCTTTTGCTT-GACGTTCTCGATGGTGTCAGAGCT---CTC 238247 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | || || || || || ||||| || || || ||||||||||| Sbjct 238246 CACCTCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 238196 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| |||||||| || || ||| ||| || || |||||||| |||| | ||||| | Sbjct 238183 ACGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCC 238124 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| |||| || || || || || || | || ||||| || | || | ||||| || Sbjct 238123 GTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCGGGAGGAATGCCTTCCTT 238064 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || || || | ||| || | |||||| || || || || | |||| Sbjct 238063 GTCCTGGATCTTTTGCTTGA-CATTCTCGATGGTGTCTGAAGACTCGACCTCCAGAGTGA 238005 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || ||||| || || |||||||||||| Sbjct 238004 TGGTCTTTCCCGTCAACGTCTTGACGAAGATCTGCATA 237967 >seq753 Length=293645 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| |||||||| || |||||| ||| || || |||||||| |||| Sbjct 49614 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 49673 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| |||| || || || ||||| |||| ||||||||||| | || Sbjct 49674 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 49733 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || || |||| || | ||||| |||||||| Sbjct 49734 ATGCCTTCCTTGTCCTGGATCTTTTGCTT-GACATTTTCAATAGTGTCAGAGGATTCCAC 49792 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || |||||||||||| Sbjct 49793 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 49841 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || |||||| ||| ||||| ||||||||||| | | ||||| |||| ||| Sbjct 49176 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 49235 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || || | ||||||||| || | || | || || ||||| Sbjct 49236 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 49295 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || ||| || | || | ||||||| ||||| || | ||||| || || Sbjct 49296 ATCTTTTGCTTC-ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTT 49354 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 49355 TCCGGTAAGAGTCTTGACGAAGATCTGCATA 49385 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| |||||||| || |||||| ||| || || |||||||| |||| | || || | Sbjct 49397 ACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACC 49456 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || || ||||| || || | |||||||| || | || | || || || Sbjct 49457 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTT 49516 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| |||||||| |||| | | || | ||||||| ||||| || | || | Sbjct 49517 GTCCTGGATTTTCTGCTTCA-CGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAA 49575 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || || || ||||||||||| Sbjct 49576 TGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 49612 >seq2 Length=914981 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| ||| || || || ||||| || | Sbjct 66112 ACCACCACGGAGACGAAGGACCAAGTGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGC 66171 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||| || || |||||||| |||||||||||||| || | || Sbjct 66172 AAGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGGGG 66231 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || ||||| ||| || | || | |||||| || || | Sbjct 66232 AATGCCTTCCTTGTCCTGGATCTTCTGCTTC-ACGTTTTCAATGGTGTCAGAAGACTCGA 66290 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| |||||| || || || || || || || || ||||||||||| Sbjct 66291 CCTCAAGCGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 66339 >seq917 Length=72685 Score = 100 bits (110), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 || || |||||||| |||| ||| ||||| |||| |||| || || || || ||||| Sbjct 48014 TTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAAATA 48073 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 | |||||||||||| | || | || || || || || || || ||| |||| || Sbjct 48074 AGACGCTGCTGATCGGGGGGGATTCCCTCCTTATCCTGGATCTTTTGCTTC-ACATTCTC 48132 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | ||||||| || ||||| || | ||||| ||||| ||||| | ||| || || || Sbjct 48133 GATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTTTTGCCTGTGAGCGTCTTCACGAA 48192 Query 33741 GATCTGCAT 33749 ||||||||| Sbjct 48193 GATCTGCAT 48201 >seq942 Length=135290 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || ||| ||| || || || |||||||| | Sbjct 53094 ACCACCACGGAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGC 53035 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || |||||||| || |||||||||||||| || | || Sbjct 53034 GAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 52975 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || ||||| ||| || | || | ||||||| |||| Sbjct 52974 AATGCCTTCCTTGTCCTGGATCTTCTGCTTC-ACGTTCTCGATGGTGTCGGAGCTCTCCA 52916 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || | || || || |||||||||||| Sbjct 52915 CTTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCATA 52866 >seq1391 Length=76266 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || || ||| || || || |||||||| | Sbjct 37716 ACCACCACGGAGACGAAGGACCAAGTGGAGGGTAGACTCCTTCTGAATATTGTAATCAGC 37775 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || ||||| || |||||||||||||| || | || Sbjct 37776 GAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGGGG 37835 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || ||||| ||| || | || | |||||| || || | Sbjct 37836 AATGCCTTCCTTGTCCTGGATCTTCTGCTTC-ACGTTTTCAATGGTGTCAGACGACTCGA 37894 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || || || || || ||||||||||| Sbjct 37895 CCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 37943 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || |||||| ||| ||||| |||||||| |||| || || || |||| ||| Sbjct 37507 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCC 37566 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || |||||||| |||| ||||||||||| | || | ||||| ||||| Sbjct 37567 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 37626 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || || || | || | ||||||| ||||| || | || || || || Sbjct 37627 ATCTTTTGCTT-GACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTT 37685 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 37686 GCCGGTAAGAGTCTTGACGAAGATCTGCATA 37716 >seq372 Length=15075 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || ||||| ||| ||||| |||||||| |||| | ||||| | || ||| Sbjct 1420 ACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCC 1479 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || || || || ||||| || ||||| || | || | ||||| ||||| Sbjct 1480 AGCTGCTTGCCAGCGAAGATCAATCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 1539 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||||| |||| | | || | |||||| || ||||| || | ||||| ||||| Sbjct 1540 ATCTTCTGCTTCA-CGTTCTCGATGGTGTCCGAGGACTCCACTTCGAGGGTGATGGTTTT 1598 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || || |||||||||||| Sbjct 1599 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 1629 >seq1090 Length=245726 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| ||| || || |||||||| |||| || ||||| |||| ||| Sbjct 31457 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 31398 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || || || || ||||| |||||||| || | || | ||| || ||||| Sbjct 31397 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 31338 Query 33661 ATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || |||| | | ||| || || || || || |||| ||||| ||||| Sbjct 31337 ATCTTTTGCTTCA-CGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTT 31279 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || || ||||||||||| Sbjct 31278 GCCAGTCAAGGTCTTAACGAAGATCTGCAT 31249 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | ||||| || || ||| ||| || || |||||||| || | Sbjct 108885 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 108944 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| |||| || || || || || |||| |||||||| || | || Sbjct 108945 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 109004 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || || | ||| || | |||||| || ||||| Sbjct 109005 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGA-CATTCTCGATGGTGTCCGAGGACTCCAC 109063 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || || || || || || || || ||||||||||| Sbjct 109064 CTCCAGGGTAATTGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 109111 >seq477 Length=14742 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| | ||||| || || ||| || ||||| |||||||| |||| Sbjct 5629 CCGCCACGCAGACGAAGGACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCC 5688 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || || || ||||| ||||||||||| | || Sbjct 5689 AGGGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGGGGA 5748 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || ||||| || | || | ||| ||| ||||| Sbjct 5749 ATGCCTTCCTTGTCCTGGATCTTTTGTTT-GACGTTCTCGATGGTATCGGAGCTCTCCAC 5807 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || ||||| ||||||||||| Sbjct 5808 CTCCAAAGTGATTGTCTTACCGGTCAGGGTCTTTACGAAGATCTGCAT 5855 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||||| || || ||| ||| || || |||||||| |||| Sbjct 5857 CCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 5916 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| |||| || || ||||| || || | || ||||| || | || Sbjct 5917 AAGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCAGGGGGG 5976 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| || || |||| | | || | |||||| || ||||| Sbjct 5977 ATACCCTCCTTGTCCTGAATCTTTTGCTTCA-CGTTCTCGATGGTGTCCGAGGACTCCAC 6035 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || ||||| || || || || || ||||||||||| Sbjct 6036 CTCCAAGGTAATAGTCTTACCAGTCAAGGTCTTAACGAAGATCTGCAT 6083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697570241600