Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1057 140 3e-28 >seq1057 Length=235048 Score = 140 bits (154), Expect = 3e-28 Identities = 257/370 (69%), Gaps = 10/370 (3%) Strand=Plus/Minus Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||||||| | || || ||||| || || || || |||||||| ||||| || || || Sbjct 120162 GAAGTTCAACTGCCGGAGGCACGTTGCTTCTACGGCTTTCAAATCGCCATGGAGAACATC 120103 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCAT 44035 || ||||| |||||| || || || || || ||| ||||||| | | | || ||| | Sbjct 120102 CACTCGGAGATGTACTCGCTGCTCATCGACACCTACGTCAAAGACGTGAAAGAAAAGGCT 120043 Query 44036 CGATTGTTTAATGCGATAGAAACAGTACCT-GCGATTAAACATAAAGCAGACTGGGCCCT 44094 | ||||| || || || || || ||| ||| | || | || || || ||||| || Sbjct 120042 AAGCTCTTTAACGCCATTGAGACGGTGCCTAGCG-TGAAGAAGAAGGCCGAATGGGCGCT 119984 Query 44095 TAAATGGATA---AATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 |||||| || || | | |||||| || || |||| ||||| | || Sbjct 119983 GCGTTGGATAGAAAAGCCACAAG---CTTTTGCTCTGCGGCTCATCGCCTTTGCCGCAGT 119927 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 ||||||||| ||||| || || || || ||| ||||| || ||| | |||||| |||| Sbjct 119926 GGAAGGCATCTTCTTCTCGGGTTCCTTCTGC-GCCATCTTCTGGCTGAAGAAAAGAGGGC 119868 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 |||||||||| | | || || ||| | ||||| ||||||||| | ||||| | Sbjct 119867 TGATGCCTGGACTCAGCTTCAGCAACGAGCTCATAAGCAAGGATGAAGGCATGCATTGTG 119808 Query 44271 ATTTTGCTTG 44280 | |||||||| Sbjct 119807 ACTTTGCTTG 119798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397448225388025