Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1059 109 5e-19 seq477 98.7 8e-16 seq753 96.9 3e-15 seq1090 93.3 4e-14 seq976 89.7 4e-13 seq151 89.7 4e-13 seq1129 86.0 5e-12 seq942 86.0 5e-12 seq673 86.0 5e-12 >seq1059 Length=95284 Score = 109 bits (120), Expect = 5e-19 Identities = 315/482 (65%), Gaps = 7/482 (1%) Strand=Plus/Minus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||| |||| ||||||| | || |||||| | || || ||||||||||| || Sbjct 57048 GGGAGCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCCACTCGCTTCATGAA 56989 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 | ||||| ||||| | |||||| || || ||||| || ||| || | || Sbjct 56988 TAGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTG 56929 Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 | || |||| | | ||| || |||| |||||| ||||| || ||||| || || || Sbjct 56928 GTTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGC 56869 Query 131782 CATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || |||||||| || || ||||| | || | | | ||| ||| | || Sbjct 56868 AAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGAC 56809 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 ||| | ||| || | |||||| | | ||||| || | ||||||||| Sbjct 56808 GCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGATGTAGCTGTGCGA 56749 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 ||| | |||| |||| ||| |||| || || || || || || ||||| | ||||| Sbjct 56748 GGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGCA 56689 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 || |||| |||| ||||| || || | ||||||| | || || |||||||| Sbjct 56688 TTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGCA 56629 Query 132019 AGAGGACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTGTGTA 132076 || || | || | | ||||||||| |||| | | |||||| ||||||| ||| Sbjct 56628 GGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGA--GTGGGGGTGGCGTGAGTA 56571 Query 132077 AA 132078 || Sbjct 56570 AA 56569 >seq477 Length=14742 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| || | ||||| || | || || || || || || ||||||||| Sbjct 6083 TGCCACCGCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 6142 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| |||| || ||||| || |||||| | || | ||| || || || || | Sbjct 6143 CCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCAGGGG 6202 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| || || |||||| | || | | | || | ||||| | || || | Sbjct 6203 GAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCAATGGTGTCCGAGGACTCGA 6262 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || | ||| || | ||||| || || || || || ||||||||||| Sbjct 6263 CCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 6311 >seq753 Length=293645 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| || ||||| || || | |||| |||| || Sbjct 49176 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 49235 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | ||||||||||| || || || || | ||||| || || | Sbjct 49236 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 49295 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | | || | ||||| | | || ||||| || || || | || Sbjct 49296 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTTT 49355 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || ||||| || || ||||| |||||| || Sbjct 49356 CCGGTAAGAGTCTTGACGAAGATCTGCATACCT 49388 >seq1090 Length=245726 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || |||||||| || | |||| | |||||| Sbjct 123488 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCTTCG 123429 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || || ||||| || || || || | |||||| || || | Sbjct 123428 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGG 123369 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | ||||| | | || || || ||||| || | ||| Sbjct 123368 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 123309 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || ||||| ||||||||||| Sbjct 123308 CCAGTGAGGGTCTTCACGAAGATTTGCAT 123280 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||||| || | || || || || || || |||||||| Sbjct 109111 TGCCACCGCGGAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 109170 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| | ||||||||||| || ||||| | || | || || || || || | Sbjct 109171 CCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCAAAGATCAAGCGTTGCTGGTCGGGGG 109230 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| || || |||||| | || | | | || | ||||| | | || | Sbjct 109231 GAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCA 109290 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| || || || ||||| ||||||||||| Sbjct 109291 CCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 109339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || ||||| || | ||||| || | || || || || || || || ||||| Sbjct 123963 GCCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGC 123904 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | |||| |||| || ||||| || || ||| | || || || || || || || || Sbjct 123903 CAAGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCAGGAGG 123844 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || |||||| | |||| | | || | |||||| | | ||||| Sbjct 123843 AATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCAGAAGACTCAAC 123784 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| |||| || || |||| || || || ||||||||||| Sbjct 123783 CTCGAGAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATTTGCAT 123736 >seq976 Length=280112 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || || | ||||| || | || || || ||||| || ||||||||| Sbjct 141299 TGCCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 141240 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | | || |||| || ||||| || |||||| | ||||| || || || || || | Sbjct 141239 CCAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCAGGGG 141180 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| | |||| | | || | ||||| | | || | Sbjct 141179 GAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCCA 141120 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || | ||| || | ||||| || || || || || ||||||||||| Sbjct 141119 CCTCCAAAGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 141071 >seq151 Length=514231 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || || | ||||| || | ||||| || ||||| || ||||||||| Sbjct 222667 TGCCTCCCCTCAGACGGAGGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGG 222726 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| |||| || ||||| || || || | || | |||||| || || || | Sbjct 222727 CCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGCTGCTGGTCGGGAG 222786 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| | || | | | || | ||||| | | || | Sbjct 222787 GGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCA 222846 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| || || || || || ||||||||||| Sbjct 222847 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 222895 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| || ||||||||| || | |||| |||| || ||||| || || Sbjct 237936 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCC 237877 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| || || || || || || | || || || || |||||| | ||| Sbjct 237876 GCGAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 237817 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || ||||| || | ||||| || || || Sbjct 237816 ACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 237757 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 237756 TTGACGAAGATTTGCAT 237740 >seq1129 Length=232510 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | ||||| || | || || || || ||||||||||| || Sbjct 106777 CCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 106718 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| || ||||| || |||||| | ||||||||||| || || || || Sbjct 106717 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 106658 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| | |||| | | || | ||||| | | || || Sbjct 106657 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACC 106598 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||||||||| Sbjct 106597 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 106551 >seq942 Length=135290 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||||||||| || | |||| |||| || Sbjct 53075 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCGAGAGTGCGACCGTCCTCA 53016 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || | |||||| || || || || | || || || || | Sbjct 53015 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 52956 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | | || | ||||| | | || ||||| || || |||| ||| Sbjct 52955 ATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTTG 52896 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || || ||||| |||||| Sbjct 52895 CCGGTAAGAGTCTTGACGAAGATCTGCATA 52866 >seq673 Length=153926 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | || || |||| || || ||||||||| || | |||| | ||||| Sbjct 103022 TACCAAGTGAAGGGTTGACTCTTGCTGGATGTTGTAGTCGAGCAAGGTGCGACCATCTTC 103081 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||||||| | || ||| |||| || |||||||||||||| || | || |||||||| Sbjct 103082 GAGCTGTATGCCAGCGAAAATTAGCCGCTGTTGATCCGGAGGAATTCCTTCTTTATC 103138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424926087884760