Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1059 179 5e-40 >seq1059 Length=95284 Score = 179 bits (198), Expect = 5e-40 Identities = 614/943 (65%), Gaps = 23/943 (2%) Strand=Plus/Minus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||| |||| ||||| |||| || || | ||||| |||||| || ||||| ||| Sbjct 57341 ACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTTGGAGGTG 57282 Query 111281 TACTCTAAAATTTCTGTACATAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 ||||| | || || || || | |||| |||| ||| || || | |||| |||| Sbjct 57281 TACTCCATGATCTCCGTGCAAAGGTTGCTTGAACG---AATGGTGCCGAGGTTCTGTTGG 57225 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 || ||| |||||||| |||||||| |||||||||||||| || ||||| ||| Sbjct 57224 TTGGACTTGCGGTTGCACGAGTCCTTGTATAGCATGTAGGGCGTGCCGGTCTCTATCTCG 57165 Query 111398 GATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCC 111457 | || || || ||| | || ||| || | |||| || |||||| Sbjct 57164 CTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAACGCTCCTCCTGGCTCGGCCCTCC 57105 Query 111458 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 111517 ||||| |||||||| || ||||||||||| ||| | || | | || || Sbjct 57104 TGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGA 57045 Query 111518 GCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCA--ACCCGCTTCATGAAAA 111575 || | || ||||| || || ||||| | || || ||| || ||||||||||| | Sbjct 57044 GCTTCGTTGGGACAAAACAGGGACCACT--CCTGATTGCTCTCCACTCGCTTCATGAATA 56987 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635 |||| |||| ||| || | ||||||| ||||| || ||| || | || |||| Sbjct 56986 GGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTGGT 56927 Query 111636 TGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 | || | | ||| || ||||| | | ||||||||||||||||| | ||||| || Sbjct 56926 T-CTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGCA 56868 Query 111695 ATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 111751 | || ||| || || | || |||| | || || | || ||| ||||||| ||| Sbjct 56867 AAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGACG 56808 Query 111752 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATT 111810 |||||||| || || | ||| | || ||||| || || || || || | | Sbjct 56807 CGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGAT-GTAGCTGTGCGA 56749 Query 111811 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 111870 ||| | | || | | | || || || ||||| ||| ||||| || || Sbjct 56748 GGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGCA 56689 Query 111871 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 111930 | | | || || | ||||| || | ||| ||||||| | | | || | ||||| Sbjct 56688 TTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGCA 56629 Query 111931 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990 || | ||||| | ||| || || |||||||| || || || |||||| | || Sbjct 56628 GGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGAGTGGGGGTGGCGTGAGTAAA 56569 Query 111991 -CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049 | | || |||||| | ||| ||||| | | ||| | |||||||| || |||| Sbjct 56568 GTAGAGGTT-GGACATGAGATTGTAGGTCTCAATGGCAGCAGCAATGTCTCCCATATGGA 56510 Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCC 112109 ||||||| || || ||||||| ||||| || || | || | || |||| || | | Sbjct 56509 TGCCGATGGCAACTCGCATGATCATGTGTTGAGGCCTCTCAACGATCTTGCCCTCCA--C 56452 Query 112110 GTTGAAGA--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 112150 ||||||| |||||| |||| | ||| || | ||||||||| Sbjct 56451 CTTGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAGCCAAAGTAA 56409 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 110667 TGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATG 110726 ||||||||||| || || || || | | | | | ||||||||| | ||||| | Sbjct 57913 TGTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCGAGAGTAGATGTTGGAAGTGTAGG 57854 Query 110727 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 110786 | |||||||| ||||| || || | ||| || | |||||||||||| ||||| || |||| Sbjct 57853 GCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGCATGGGAGCCA 57794 Query 110787 TCAAAAGACTGTTACGAAGACCCTTCTCCTTGAT 110820 ||| | ||||| | || || | ||||||||| Sbjct 57793 CCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGAT 57760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628019400108000