Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1391 89.7 4e-13 seq753 89.7 4e-13 seq2 89.7 4e-13 seq976 87.8 1e-12 seq477 86.0 4e-12 seq1090 84.2 2e-11 seq1129 82.4 5e-11 seq942 82.4 5e-11 seq151 82.4 5e-11 >seq1391 Length=76266 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || |||||||| || || |||||| | || || || ||| || Sbjct 37715 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTGGAAGTGGAGAGCTCC 37656 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||| ||||| || ||||| ||||| | || | Sbjct 37655 GAC-----ACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCG 37601 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || |||||||| || || |||| |||| || | | || |||| | Sbjct 37600 ATCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTGGCCGACT 37541 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 ||||||||||||| ||| |||| | || ||||| Sbjct 37540 ACAACATCCAAAAGGAGTCCACTCTCCACTTGGT 37507 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || || | ||||| || ||||| | || || || ||| || Sbjct 37488 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGAGCTCC 37429 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||| ||||| || || || || || |||| | Sbjct 37428 GAC-----ACCATCGAGAACGTCAAGCAAAAGATCCAAGATAAGGAGGGCATTCCCCCTG 37374 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | |||||||| || || |||||||| || || |||| |||| |||| |||| |||| | Sbjct 37373 ACCAGCAACGTTTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACT 37314 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| || | || ||||| | ||| | |||||||| Sbjct 37313 ACAACATCCAGAAGGAGTCTACCCTCCACTTGGTCCTCCGTCTCCGTGGCGG 37262 >seq753 Length=293645 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || |||||||| || || || || | || || || ||| || Sbjct 49384 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCC 49325 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| || || ||||| || ||||| || || |||| | Sbjct 49324 GAC-----ACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCG 49270 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || || ||||| || || |||| |||| |||| |||| | |||| Sbjct 49269 ACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCTGATT 49210 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||||| ||| |||| | || ||||| | ||| | |||||||| Sbjct 49209 ACAACATCCAAAAGGAGTCCACTCTCCACTTGGTCCTTCGTCTTCGTGGCGG 49158 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 ||||| ||||| || ||||| ||||| | || || ||||| || | || ||| Sbjct 49765 GTCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAGCAGCGCCTGATCTTT 49706 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 || || || || |||| |||| |||| |||| |||| ||||||||||| || ||| | Sbjct 49705 GCTGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACTACAACATCCAGAAGGAGTCC 49646 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||| | || ||||| |||||| || | || ||| Sbjct 49645 ACTCTCCACTTGGTGTTGCGTCTGAGGGGAGGC 49613 >seq2 Length=914981 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || |||||||| || || |||||| | || || || ||| || Sbjct 66111 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTGGAAGTGGAGAGCTCC 66052 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||||||||| || ||||| ||||| | || | Sbjct 66051 GAC-----ACCATCGAGAACGTCAAACAAAAGATCCAGGACAAGGAAGGCATCCCTCCTG 65997 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || |||||||| || || |||| |||| || | |||| |||| | Sbjct 65996 ATCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCTTGGCCGACT 65937 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| ||| | || ||||| | ||| | || || || Sbjct 65936 ACAACATCCAGAAGGAGTCTACTCTCCACTTGGTCCTCCGTCTCCGCGGTGG 65885 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||| ||||| || || || || || ||||| | || || || | Sbjct 66568 AATGCAAATTTTCGTGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGGAGTCATC 66509 Query 27849 CGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 |||| || |||| ||||| || || || ||||| ||||| | || Sbjct 66508 CGAC-----ACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCC 66454 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || |||||||| | || || |||||||| ||| | || |||| |||| |||| |||| Sbjct 66453 GACCAGCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGAC 66394 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||||||| || ||| ||| | || |||||| | ||| |||| || ||| Sbjct 66393 TACAACATCCAGAAGGAGTCCACCCTCCACTTGGTTCTTCGTCTGCGGGGAGGC 66340 >seq976 Length=280112 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 ||||| || || || ||||| || ||| |||| || ||||| || || || || Sbjct 161199 GTCAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCTTGATCTTC 161258 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 ||||| || || |||| |||| |||| | || |||| ||||||||||| || ||| | Sbjct 161259 GCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCC 161318 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || | || ||||| |||||| | ||||||||| Sbjct 161319 ACCCTCCACTTGGTCTTGCGTCTCCGTGGCGGC 161351 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || || | ||||| ||| || || | || || || ||| || Sbjct 141527 ATGCAGATCTTCGTCAAGACGTTGACTGGCAAAACCATCACCCTGGAAGTGGAGAGCTCC 141586 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||||||||| || ||||| || || |||| | Sbjct 141587 GAC-----ACCATCGAGAACGTCAAACAAAAGATCCAAGACAAGGAGGGCATTCCCCCTG 141641 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || || || || ||||| || || |||| |||| |||| |||| |||| | Sbjct 141642 ACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACT 141701 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGA 28019 |||||||||| || ||| ||| | || ||||| | || | || ||||| || Sbjct 141702 ACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGCCTTCGCGGCGGGGA 141756 >seq477 Length=14742 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 ||||||||||| || ||||| ||||| |||| || ||||| || || || || Sbjct 5780 GTCAAACAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGCGCTTGATCTTC 5721 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 || || || || |||| |||| |||| | || |||| |||||||||||||| || | Sbjct 5720 GCTGGCAAGCAGCTGGAGGACGGTCGCACCCTGGCCGACTACAACATCCAAAAGGAATCC 5661 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || | || ||||| | ||| |||||||||| Sbjct 5660 ACCCTCCACTTGGTCCTTCGTCTGCGTGGCGG 5629 >seq1090 Length=245726 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || ||||| || || ||||| || || || |||| || || ||| | Sbjct 109340 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAGAGCTC 109281 Query 27849 CGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 |||| || |||| ||||| || || || ||||| || ||| |||| Sbjct 109280 CGAC-----ACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCC 109226 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || |||||||| || || |||||||| || || | || || | |||| | || | || Sbjct 109225 GACCAGCAACGCTTGATCTTTGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGGCTGAC 109166 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||||||| || ||| ||| | || ||||| | ||| | || || ||| Sbjct 109165 TACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTCCGCGGTGGC 109112 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || ||||| || || ||||| || || || |||| || || ||| | Sbjct 123279 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAGAGCTC 123338 Query 27849 CGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 |||| || |||| ||||| || || || ||||| || ||| |||| Sbjct 123339 CGAC-----ACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCC 123393 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || ||||| || | || |||||||| || || | || || | |||| | || | || Sbjct 123394 GACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGGCTGAC 123453 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||| || ||| ||| | || ||||| | ||| | |||||||| Sbjct 123454 TACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTCCGTGGCGG 123506 >seq1129 Length=232510 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 || || ||||| || ||||| |||||| | || || ||||| || || || || Sbjct 106854 GTGAAGCAAAAGATCCAGGACAAGGAAGGTATCCCTCCCGATCAGCAGCGCTTGATCTTC 106913 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 || || || || |||| |||| |||| | || |||| |||||||||||||| ||| | Sbjct 106914 GCTGGTAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAACATCCAAAAGGAGTCC 106973 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || | || ||||| |||||| | ||||| ||| Sbjct 106974 ACCCTCCACTTGGTGTTGCGTCTCCGTGGTGGC 107006 >seq942 Length=135290 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || ||||||||||| || |||||| | || || || ||| || Sbjct 53095 ATGCAGATCTTCGTAAAGACTCTTACTGGCAAGACTATTACCCTGGAAGTGGAGAGCTCC 53154 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| || || || || || ||||| ||||| |||| | Sbjct 53155 GAC-----ACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCTG 53209 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || || ||||| || || |||| || | || | ||| |||| | Sbjct 53210 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGTACCTTAGCCGACT 53269 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||| || ||| ||| | || ||||| | ||| | ||||||||| Sbjct 53270 ACAACATCCAGAAGGAGTCCACCCTTCACTTGGTCCTCCGTCTTCGTGGCGGC 53322 >seq151 Length=514231 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 ||||| ||||| || ||||| ||||| |||| || |||||||| | || || Sbjct 238043 GTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAACGCCTCATCTTC 238102 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 || || || || |||| |||| |||| |||| |||| ||||||||||| || ||| | Sbjct 238103 GCGGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACTACAACATCCAGAAGGAGTCC 238162 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || | || ||||| |||||| | || || ||| Sbjct 238163 ACCCTCCACTTGGTGTTGCGTCTCCGCGGAGGC 238195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355855438997835