Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1059 107 3e-18 >seq1059 Length=95284 Score = 107 bits (118), Expect = 3e-18 Identities = 389/607 (64%), Gaps = 4/607 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || |||||||| |||||| |||| || ||| ||| || ||||| | || ||| Sbjct 57080 TCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGAGCTTCGTTGGGACAAAACAGGGAC 57021 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| || || || || ||||| || || || || | ||| || || ||| Sbjct 57020 CACTCCTGATTGCTCTCCACTCGCTTCATGAATAGGTCCGGAACCCAGAGCGCGTAAAAG 56961 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || |||| || | | || || || || ||||| || || || || ||||| | | Sbjct 56960 AGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTGGTTCTTCTTCAGCTCCAGAAACTCGAAA 56901 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | || | |||||||| || | || | || | | | || ||||| ||||| Sbjct 56900 ACGTCCGCGTGCCATGGCTCCAAGTAGACAGCAAAAGCTCCTTTGCGTTTGCCTCCTCCT 56841 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||||||||||| ||| | || | | ||| || || | ||||| || Sbjct 56840 TGGTCGACGTATCTGGCAGTGTCGTTAAAGACGCGAAGCATCGGGATGAGACCGTTCGAC 56781 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || ||||| |||||| || || || | ||||| || | | ||||| Sbjct 56780 GTGCCATTAGTTCCACGGATGTAGCTGTGCGAGGCACGGATTGTGTGTACGCTGAGGCCG 56721 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || || ||||| | || || | || | ||||| ||||||||||| Sbjct 56720 ATGCCACCAGCGGCCTTGGAGATCAAGGCGCATTGCTTTAGGGTGTCGTAGATGCCCTCG 56661 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||| | || | ||| ||| ||| | ||| | | | || || Sbjct 56660 ATGCTGTCCTCCCTCATCGTGAGCAAAAAGCAGGAAGAGAGTTGCGGCCGCTCTGTGCCG 56601 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || || | || || | || ||||| || | | || | |||||||| || Sbjct 56600 GCGTTGAAGAGAGTGGGGGTGGCGTGAGTAAAGTAGAGGTTGGACATGAGATTGTAGGTC 56541 Query 77060 TCAATAACTGCTTC--TATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 ||||| | || | | | |||||| ||| || || | || || ||||| | ||| | Sbjct 56540 TCAATGGCAGCAGCAATGTCTCCCAT--ATGGATGCCGATGGCAACTCGCATGATCATGT 56483 Query 77118 GCTGAGG 77124 | ||||| Sbjct 56482 GTTGAGG 56476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712920096753600