Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq14654 123 5e-23 seq63 102 2e-16 seq2 102 2e-16 seq5480 98.7 2e-15 seq149 98.7 2e-15 seq14540 96.9 7e-15 seq14517 96.9 7e-15 seq6892 96.9 7e-15 seq5187 96.9 7e-15 seq4521 96.9 7e-15 seq4429 96.9 7e-15 seq768 96.9 7e-15 seq213 96.9 7e-15 seq132 96.9 7e-15 seq70 96.9 7e-15 seq60 96.9 7e-15 seq17 96.9 7e-15 seq4 96.9 7e-15 seq5388 87.8 4e-12 >seq14654 Length=53260 Score = 123 bits (136), Expect = 5e-23 Identities = 260/383 (68%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 || ||||||||||||||| || ||| | ||| | |||||||| || || | ||| Sbjct 48290 TTTTGCGCCATCTTTTGGTTGAAGAAGAGAGGCCTTATGCCTGGACTTTGTTTCAGTAAT 48231 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| ||||| | |||||||| | || | || | | || | || | | Sbjct 48230 GAGCAGATCAGCAGGGACGAGGGCATGCACTGTGACTTTGCCTGCCTCCTCTACAATATG 48171 Query 230350 CTCCAGAACAAGCTACCATTCGA-GACG-GTCAAACAA-ATCATTACAGAAGCAGTTGAA 230406 ||||||||| ||| | | | |||| | | | ||| || || | || ||||| || Sbjct 48170 ATCCAGAACAG---ACCCTCCAACGACGTGCCCACCAAGATTATCGCTGAGGCAGTGGAG 48114 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | ||||||||||| | | || | ||||| | || || ||||||||||| || Sbjct 48113 ATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGGCTCATCGGCATGAACGCCGAG 48054 Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| | |||||||| || || || || |||||| | | || || || || | |||| Sbjct 48053 CTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTGGTGGCCCTCGGCTGCGAG 47994 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || | |||||| ||| |||||| |||| | ||||||||||| || | |||| ||| Sbjct 47993 AAGATCTACAACGCTACGAACCCGTTTGACTGGATGGAGCTCATCTCCTTGGAAGGCAAG 47934 Query 230587 ACCAACTTCTTCGAAAAGCGTGT 230609 |||||||| ||||| | ||| || Sbjct 47933 ACCAACTTTTTCGAGAGGCGCGT 47911 >seq63 Length=199166 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 39658 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 39599 Query 165776 ATGGGC 165781 |||| Sbjct 39598 GAGGGC 39593 >seq2 Length=125603 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 95938 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 95879 Query 165776 ATGGGC 165781 |||| Sbjct 95878 GGGGGC 95873 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 100337 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 100396 Query 165776 ATGGGC 165781 |||| Sbjct 100397 GGGGGC 100402 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 100940 CTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 100881 Query 165776 ATGGGC 165781 |||| Sbjct 100880 GGGGGC 100875 >seq5480 Length=1187 Score = 98.7 bits (108), Expect = 2e-15 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || ||| | ||||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 347 CTCGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCG 288 Query 165767 AGCCCCACG 165775 ||||||||| Sbjct 287 AGCCCCACG 279 >seq149 Length=121200 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| | ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 39721 TGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 39662 Query 165769 CCCCACG 165775 ||||||| Sbjct 39661 CCCCACG 39655 >seq14540 Length=27423 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 17066 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 17125 Query 165770 CCCACG 165775 |||||| Sbjct 17126 CCCACG 17131 >seq14517 Length=79135 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 9076 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 9135 Query 165770 CCCACG 165775 |||||| Sbjct 9136 CCCACG 9141 >seq6892 Length=969 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 863 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 804 Query 165770 CCCACG 165775 |||||| Sbjct 803 CCCACG 798 >seq5187 Length=1243 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 1147 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 1088 Query 165770 CCCACG 165775 |||||| Sbjct 1087 CCCACG 1082 >seq4521 Length=1378 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 1238 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 1179 Query 165770 CCCACG 165775 |||||| Sbjct 1178 CCCACG 1173 >seq4429 Length=1394 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 315 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 256 Query 165770 CCCACG 165775 |||||| Sbjct 255 CCCACG 250 >seq768 Length=3828 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 1011 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 1070 Query 165776 ATGGGC 165781 | ||| Sbjct 1071 CTTGGC 1076 >seq213 Length=29148 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 28145 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 28204 Query 165776 ATGGGC 165781 | ||| Sbjct 28205 CTTGGC 28210 >seq132 Length=92410 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 76506 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 76447 Query 165776 ATGGGC 165781 | ||| Sbjct 76446 CTTGGC 76441 >seq70 Length=114167 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 77745 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 77804 Query 165770 CCCACG 165775 |||||| Sbjct 77805 CCCACG 77810 >seq60 Length=208823 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 203311 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 203252 Query 165776 ATGGGC 165781 | ||| Sbjct 203251 CTTGGC 203246 >seq17 Length=220212 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct 182986 CTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCACG 182927 Query 165776 ATGGGC 165781 | ||| Sbjct 182926 CTTGGC 182921 >seq4 Length=55451 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 22966 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 23025 Query 165770 CCCACG 165775 |||||| Sbjct 23026 CCCACG 23031 >seq5388 Length=1203 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||||| ||||| ||||||| ||||||| ||| |||||| Sbjct 1057 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGGTCGAGC 1116 Query 165770 CCCACG 165775 |||||| Sbjct 1117 CCCACG 1122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057624779014370