Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq182 201 1e-46 >seq182 Length=84632 Score = 201 bits (222), Expect = 1e-46 Identities = 489/731 (67%), Gaps = 11/731 (2%) Strand=Plus/Minus Query 16696 TTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGT 16755 ||| || | ||| | ||||| ||| | ||| ||| |||||| ||| || |||||| Sbjct 22578 TTCAAACATGTTGGCTTTGCTCTCCAAAGAGATAAGCTCCATCCAATAGAATGGATTAAC 22519 Query 16756 AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTAT 16815 ||| ||| | || | | || || | | || | | |||||| ||||| ||||| Sbjct 22518 GGCTTCAAAGAGCTTCTTGCATCCAAGAGCCACCATAAGCCGATCCGCCACAAACTCTAT 22459 Query 16816 ATATTGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCA 16874 ||| |||||||| | || ||| ||||| || || || || || ||||||| || | | Sbjct 22458 ATACTGGCACATGAGCTCCGCA-TTCATGCCGATGAGTCGAACAGGAAGAGACTCGGAAA 22400 Query 16875 AAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC 16933 ||| || || ||| || |||| |||||| ||| || | | | ||||||| | Sbjct 22399 CAAACTCCTT-CTCGATGTCAACAGCTTCCGCAATGATCCGACGGATGATCTCCTCGGGC 22341 Query 16934 GGTGTATGT-TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTC 16992 ||| | | |||| ||| || || || ||| || || || ||||| | || || || Sbjct 22340 GGTTTGTCCCTTAACATGCCGAA-CAGCATACAAGCAAAGTCACAATGCATGCCTTCATC 22282 Query 16993 TCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCA 17052 ||||| || || ||||| || | | ||| |||||| |||| |||||| | ||| Sbjct 22281 CCTGCTTATGAGCTCGTTGCTGAAGCTGAGCCCAGGCATCAGCCCTCTTTTCTTCAGCCA 22222 Query 17053 AAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAA 17112 || || ||| ||| || || || ||||| || || || || | ||||| || || | Sbjct 22221 GAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCTTCCACTGCGGCAAAGGCAATGAG 22162 Query 17113 TCGTTCGGCGTACG-TCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT 17171 || || | | | | | |||| || |||| | || |||| ||||| || | Sbjct 22161 CCGCAGAGCAAAAGCTTGTGGCTTTTCTA----TCCAACGCAGCGCCCATTCGGCCTTCT 22106 Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGA 17231 ||| | || | || ||| || ||||| ||||| | || | ||||| | | ||| Sbjct 22105 TCTTCACGCTAGGCACCGTCTCAATGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTT 22046 Query 17232 TTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCT 17291 | | || || |||||||| || |||||| || ||||| |||||||||||||| || | Sbjct 22045 TGACGTAGGTGTCGATGAGCAGCGAGTACATCTCCGAGTGGATGTTCTCCATGGCGATTT 21986 Query 17292 GAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTA 17351 |||| ||||| ||||| || || |||| | |||||||||| ||| || | || | Sbjct 21985 GAAAGCCGTAGAAGCAACGTGCCTCCGGCAGTTGAACTTCCTTCATGAAGCGGGCAGCAA 21926 Query 17352 GATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAAT 17411 | || || ||||||||| || || |||||||| ||||| | ||||| || || | Sbjct 21925 GGTTCTCCACCACGATGCCATCCGAGGCAGCGAAAAAGGCCAACACGTGCTTGATAAAGT 21866 Query 17412 ATTTTTCGTCC 17422 ||||||| Sbjct 21865 GGCGTTCGTCC 21855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517450507465320