Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq7184 95.1 9e-15 seq1075 87.8 1e-12 >seq7184 Length=931 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | | |||| ||| || || || || || || ||||||||||||||| Sbjct 600 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 659 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | || |||| || ||||| ||| |||| || | || ||||| || Sbjct 660 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 719 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || || | ||||||||| | | ||| ||||||| || || | Sbjct 720 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCACT 779 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | |||||||| | || || || || || ||||| Sbjct 780 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 >seq1075 Length=2391 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| |||| ||| || || || || || || |||||||||||||| Sbjct 1676 TCCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1617 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || || |||| ||| || ||||| |||| | || || || || || Sbjct 1616 CAGGGTGCGACCGTCCTCCAGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGG 1557 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || || | |||||| || | ||| ||| ||| | |||| Sbjct 1556 GATACCCTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGAC 1497 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||||| ||||||| ||||| || || || || || ||||| Sbjct 1496 CTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379276042774755