Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq182 156 5e-33 >seq182 Length=84632 Score = 156 bits (172), Expect = 5e-33 Identities = 308/454 (68%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| || || || || |||| || || || || || || | ||||| Sbjct 22319 AACAGCATACAAGCAAAGTCACAATGCATGCCTTCATCCCTGCTTATGAGCTCGTTGCTG 22260 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || |||| || ||||| || || | || || ||||| || |||| ||| || || Sbjct 22259 AAGCTGAGCCCAGGCATCAGCCCTCTTTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCC 22200 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC--GGCGC 33750 || |||||||| ||||| ||||| ||||||||||| || | | || || | | || Sbjct 22199 GAGAAGAAGATGCCTTCCACTGCGGCAAAGGCAATGAGCCGCAGAGCAAAAGCTTGTGGC 22140 Query 33751 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | | | |||||| | ||||| ||||||||||| || || | ||||| ||| || | Sbjct 22139 TTT--TCTATCCAACGCAGCGCCCATTCGGCCTTCTTCTTCACGCTAGGCACCGTCTCAA 22082 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 |||| |||||||| | ||||| || ||||| || || || ||||| | || Sbjct 22081 TGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTTTGACGTAGGTGTCGATGAGCAGCG 22022 Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930 ||||| ||||| || ||||| || ||||| || ||||| |||||||| || | |||| Sbjct 22021 AGTACATCTCCGAGTGGATGTTCTCCATGGCGATTTGAAAGCCGTAGAAGCAACGTGCCT 21962 Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCAC 33990 | | | || ||||| | || || | || | || || ||| || ||||| Sbjct 21961 CCGGCAGTTGAACTTCCTTCATGAAGCGGGCAGCAAGGTTCTCCACCACGATGCCATCCG 21902 Query 33991 TGGCTGCAAAAAACGCCAATACATGTTTTATAAA 34024 ||| || ||||| ||||| || || || ||||| Sbjct 21901 AGGCAGCGAAAAAGGCCAACACGTGCTTGATAAA 21868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629701878888720