Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq182 107 1e-18 >seq182 Length=84632 Score = 107 bits (118), Expect = 1e-18 Identities = 174/241 (72%), Gaps = 12/241 (5%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCAT 22799 || ||| | |||||||| || || |||||| || | || || || || || |||| |||| Sbjct 22159 CGGCTCATTGCCTTTGCCGCAGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCG-CCAT 22217 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 ||||||||||||||| | ||| ||||| ||| | || ||||||| | || || Sbjct 22218 CTTCTGGCTGAAGAAAAGAGGGCTGATGCCTGGGCTCAGCTTCAGCAACGAGCTCATAAG 22277 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAA---A 22916 | | || ||||| | || ||||||||||||||||||||| || ||| ||| || | Sbjct 22278 CAGGGATGAAGGCATGCATTGTGACTTTGCTTGTATGCTG-TTCGGC--ATGTTAAGGGA 22334 Query 22917 CAAACCGTGTCAGGACGATGCA--CATCAAATCATATCTGATGCCGTTGACATTGAGACG 22974 ||||||| |||| ||| || | || ||||| | || || |||||||| |||| | Sbjct 22335 CAAACCGCCCGAGGA-GAT-CATCCGTCGGATCATTGCGGAAGCTGTTGACATCGAGAAG 22392 Query 22975 G 22975 | Sbjct 22393 G 22393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356169782865697